RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 C9orf62Q8N4C0 152 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 ZFAND2AQ8N6M9 145 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 OR10J6PQ8NGY7 276 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 TMED6Q8WW62 240 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 TVP23CQ96ET8 276 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 HYLS1Q96M11 299 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 C1QTNF4Q9BXJ3 329 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 ACTR3CQ9C0K3 210 aaPredicted RBP5.01□□□□□ -1.61
SMG6-209ENST00000571442 C11orf68Q9H3H3 251 aaKnown RBP5.01□□□□□ -1.61
SMG6-209ENST00000571442 OTORQ9NRC9 128 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 PRELID1Q9Y255 219 aa5.01□□□□□ -1.61
SMG6-209ENST00000571442 YTHDF2Q9Y5A9 579 aaKnown RBP5.01□□□□□ -1.61
SMG6-209ENST00000571442 TRAV8-1A0A0A6YYK1 113 aa5□□□□□ -1.61
SMG6-209ENST00000571442 CTXND1A0A1B0GTU2 59 aa5□□□□□ -1.61
SMG6-209ENST00000571442 INSP01308 110 aa5□□□□□ -1.61
SMG6-209ENST00000571442 MBP02144 154 aa5□□□□□ -1.61
SMG6-209ENST00000571442 SEC11BP0C7V7 166 aa5□□□□□ -1.61
SMG6-209ENST00000571442 MIFP14174 115 aa5□□□□□ -1.61
SMG6-209ENST00000571442 CDKN1BP46527 198 aa5□□□□□ -1.61
SMG6-209ENST00000571442 BTN1A1Q13410 526 aa5□□□□□ -1.61
SMG6-209ENST00000571442 AKR1C8PQ5T2L2 129 aa5□□□□□ -1.61
SMG6-209ENST00000571442 LYPD1Q8N2G4 141 aa5□□□□□ -1.61
SMG6-209ENST00000571442 STOML3Q8TAV4 291 aa5□□□□□ -1.61
SMG6-209ENST00000571442 SGK494Q96LW2 274 aa5□□□□□ -1.61
SMG6-209ENST00000571442 NEU1Q99519 415 aa5□□□□□ -1.61
SMG6-209ENST00000571442 AAMDCQ9H7C9 122 aa5□□□□□ -1.61
SMG6-209ENST00000571442 ZNF492Q9P255 531 aa5□□□□□ -1.61
SMG6-209ENST00000571442 RPH3ALQ9UNE2 315 aa5□□□□□ -1.61
SMG6-209ENST00000571442 BOLA1Q9Y3E2 137 aa5□□□□□ -1.61
SMG6-209ENST00000571442 VPS13DQ5THJ4 4388 aa5□□□□□ -1.61
SMG6-209ENST00000571442 TRAV12-3A0A0B4J271 114 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 LCE6AA0A183 80 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 A0A1B0GV50 99 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 MAP1LC3B2A6NCE7 125 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 KLLNB2CW77 178 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 PFDN1O60925 122 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 ZNF324O75467 553 aaPredicted RBP4.99□□□□□ -1.61
SMG6-209ENST00000571442 CXorf1O96002 111 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 IGLV2-11P01706 119 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 CRISP2P16562 243 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 EMP1P54849 157 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 UBE2G2P60604 165 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 C12orf74Q32Q52 190 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 GOLT1AQ6ZVE7 132 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 IQCF2Q8IXL9 164 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 FAM213BQ8TBF2 198 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 LINC00477Q96M19 166 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 ODF3Q96PU9 254 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 MAP1LC3BQ9GZQ8 125 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 PPP1R14DQ9NXH3 145 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 GOLT1BQ9Y3E0 138 aa4.99□□□□□ -1.61
SMG6-209ENST00000571442 LOC102723971A0A1B0GUV8 181 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 C7orf71A4D174 169 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 FAM74A7A6NL05 159 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 AMBPP02760 352 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 SLC25A5P05141 298 aaKnown RBP4.98□□□□□ -1.61
SMG6-209ENST00000571442 TPT1P13693 172 aaKnown RBP4.98□□□□□ -1.61
SMG6-209ENST00000571442 LEPP41159 167 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 ATP5G3P48201 142 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 SUMO1P63165 101 aaKnown RBP4.98□□□□□ -1.61
SMG6-209ENST00000571442 CCL20P78556 96 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 RRN3P1Q2M238 152 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 FAM74A1Q5RGS3 127 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 FAM222AQ5U5X8 452 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 Q6ZTC4 211 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 C11orf45Q8TAV5 145 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 RNASE8Q8TDE3 154 aaKnown RBP4.98□□□□□ -1.61
SMG6-209ENST00000571442 PHLDA1Q8WV24 401 aaPredicted RBP4.98□□□□□ -1.61
SMG6-209ENST00000571442 MBD3L1Q8WWY6 194 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 LINC00479Q96M42 142 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 LINC01587Q99440 93 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 TMEM167BQ9NRX6 74 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 DKK2Q9UBU2 259 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 TP53TG3Q9ULZ0 132 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 BIRC6Q9NR09 4857 aa4.98□□□□□ -1.61
SMG6-209ENST00000571442 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
SMG6-209ENST00000571442 TRAV34A0A0B4J273 112 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 A0A1W2PRE2 83 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 RBAKDNA6NC62 111 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 CXorf65A6NEN9 183 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 SMIM9A6NGZ8 99 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 F6UZH7 168 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 HBE1P02100 147 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 TCRAP04437 139 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 HTN1P15515 57 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 RNASE4P34096 147 aaKnown RBP4.97□□□□□ -1.61
SMG6-209ENST00000571442 CSN1S1P47710 185 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 ZNF80P51504 273 aaPredicted RBP4.97□□□□□ -1.61
SMG6-209ENST00000571442 ZNF138P52744 262 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 TAS2R60P59551 318 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 ZFP69Q49AA0 526 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 CCDC28AQ8IWP9 274 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 RXFP4Q8TDU9 374 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 C8orf49Q96NF6 230 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 TMEM208Q9BTX3 173 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 EPDR1Q9UM22 224 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
SMG6-209ENST00000571442 UMAD1C9J7I0 102 aa4.96□□□□□ -1.62
SMG6-209ENST00000571442 H7BYZ3 331 aa4.96□□□□□ -1.62
SMG6-209ENST00000571442 PAGE4O60829 102 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms