RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 FAM19A4Q96LR4 140 aa12.18□□□□□ -0.46
RPA1-203ENST00000571058 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
RPA1-203ENST00000571058 ALG5Q9Y673 324 aa12.18□□□□□ -0.46
RPA1-203ENST00000571058 TRBV7-9A0A0J9YWB2 115 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 C7orf71A4D174 169 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 F5H768 121 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 OR10J4P0C629 311 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 CRISP2P16562 243 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 CSN1S1P47710 185 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 ZNF680Q8NEM1 530 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 LINC00467Q9BRT7 94 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 SMIM3Q9BZL3 60 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 AGPAT4-IT1Q9H0P7 198 aa12.17□□□□□ -0.46
RPA1-203ENST00000571058 J3KRW8 73 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 ERCC8Q13216 396 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 FCN2Q15485 313 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 LGALS9BQ3B8N2 356 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 LINC00612Q8N6U2 182 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 ASB13Q8WXK3 278 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 MED28Q9H204 178 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 FRAS1Q86XX4 4008 aa12.16□□□□□ -0.46
RPA1-203ENST00000571058 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
RPA1-203ENST00000571058 GPX1P07203 203 aa12.15□□□□□ -0.46
RPA1-203ENST00000571058 UBE2L3P68036 154 aaKnown RBP12.15□□□□□ -0.46
RPA1-203ENST00000571058 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
RPA1-203ENST00000571058 ACOT6Q3I5F7 207 aaPredicted RBP12.15□□□□□ -0.46
RPA1-203ENST00000571058 M6PRP20645 277 aa12.14□□□□□ -0.47
RPA1-203ENST00000571058 ZNF266Q14584 549 aa12.14□□□□□ -0.47
RPA1-203ENST00000571058 ANXA2RQ3ZCQ2 193 aa12.14□□□□□ -0.47
RPA1-203ENST00000571058 RXFP4Q8TDU9 374 aa12.14□□□□□ -0.47
RPA1-203ENST00000571058 PHYHIPLQ96FC7 376 aa12.14□□□□□ -0.47
RPA1-203ENST00000571058 ZNF492Q9P255 531 aa12.14□□□□□ -0.47
RPA1-203ENST00000571058 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
RPA1-203ENST00000571058 ZNF324O75467 553 aaPredicted RBP12.13□□□□□ -0.47
RPA1-203ENST00000571058 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
RPA1-203ENST00000571058 RNASE4P34096 147 aaKnown RBP12.13□□□□□ -0.47
RPA1-203ENST00000571058 ZNF138P52744 262 aa12.13□□□□□ -0.47
RPA1-203ENST00000571058 RANP62826 216 aaKnown RBP12.13□□□□□ -0.47
RPA1-203ENST00000571058 PQLC2Q6ZP29 291 aa12.13□□□□□ -0.47
RPA1-203ENST00000571058 EIF4E3Q8N5X7 224 aaKnown RBP12.13□□□□□ -0.47
RPA1-203ENST00000571058 ZNF503Q96F45 646 aa12.13□□□□□ -0.47
RPA1-203ENST00000571058 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
RPA1-203ENST00000571058 Q9H3A6 140 aa12.13□□□□□ -0.47
RPA1-203ENST00000571058 DNAH10Q8IVF4 4471 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 ZFAND2AQ8N6M9 145 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 AQP10Q96PS8 301 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 VGLL1Q99990 258 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 WFDC1Q9HC57 220 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 LENEPQ9Y5L5 61 aa12.12□□□□□ -0.47
RPA1-203ENST00000571058 CD300CQ08708 224 aa12.11□□□□□ -0.47
RPA1-203ENST00000571058 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
RPA1-203ENST00000571058 ARL6IP6Q8N6S5 226 aa12.11□□□□□ -0.47
RPA1-203ENST00000571058 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
RPA1-203ENST00000571058 GAGE12BA1L429 117 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 H3BNG1 76 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 RGS13O14921 159 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 GAGE7O76087 117 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 NUDT3O95989 172 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 GIPP09681 153 aaPredicted RBP12.1□□□□□ -0.47
RPA1-203ENST00000571058 GAGE12FP0CL80 117 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 GAGE12GP0CL81 117 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 GAGE12IP0CL82 117 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 CCL18P55774 89 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 IBA57Q5T440 356 aaKnown RBP12.1□□□□□ -0.47
RPA1-203ENST00000571058 OR2G3Q8NGZ4 309 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 TMED6Q8WW62 240 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 OTORQ9NRC9 128 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
RPA1-203ENST00000571058 SOHLH1Q5JUK2 328 aa12.09□□□□□ -0.47
RPA1-203ENST00000571058 Q6ZR54 194 aa12.09□□□□□ -0.47
RPA1-203ENST00000571058 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
RPA1-203ENST00000571058 CMTM2Q8TAZ6 248 aa12.09□□□□□ -0.47
RPA1-203ENST00000571058 GNPNAT1Q96EK6 184 aaPredicted RBP12.09□□□□□ -0.47
RPA1-203ENST00000571058 PSMG3Q9BT73 122 aaPredicted RBP12.09□□□□□ -0.47
RPA1-203ENST00000571058 GSN-AS1Q9NRJ2 163 aa12.09□□□□□ -0.47
RPA1-203ENST00000571058 IGHV1OR15-1A0A075B7D0 117 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 DIRC3C9JPN6 131 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 M0R2N4 97 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 MBP02144 154 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 TCL1AP56279 114 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 SERF2P84101 59 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 OR5I1Q13606 314 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 OR10G4Q8NGN3 311 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 OR10G9Q8NGN4 311 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 OR10G7Q8NGN6 311 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 ARPC5LQ9BPX5 153 aa12.08□□□□□ -0.48
RPA1-203ENST00000571058 IGLV2-18A0A075B6J9 118 aa12.07□□□□□ -0.48
RPA1-203ENST00000571058 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
RPA1-203ENST00000571058 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
RPA1-203ENST00000571058 RAB2AP61019 212 aa12.07□□□□□ -0.48
RPA1-203ENST00000571058 Q6ZTI0 123 aa12.07□□□□□ -0.48
RPA1-203ENST00000571058 INO80EQ8NBZ0 244 aaPredicted RBP12.07□□□□□ -0.48
RPA1-203ENST00000571058 Q8TAT8 98 aa12.07□□□□□ -0.48
RPA1-203ENST00000571058 PGPA6NDG6 321 aa12.06□□□□□ -0.48
RPA1-203ENST00000571058 CDC34P49427 236 aaPredicted RBP12.06□□□□□ -0.48
RPA1-203ENST00000571058 PRR9Q5T870 116 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms