RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 GATA2P23769 480 aaPredicted RBP7.62□□□□□ -1.19
VPS53-207ENST00000570510 PDE6HQ13956 83 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 SPINK13Q1W4C9 94 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 C10orf113Q5VZT2 155 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
VPS53-207ENST00000570510 LINC00305Q7Z4B0 112 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 OR5C1Q8NGR4 320 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 C16orf74Q96GX8 76 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 RSG1Q9BU20 258 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 MED28Q9H204 178 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 SLC39A9Q9NUM3 307 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 TMEM14CQ9P0S9 112 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 PXMP4Q9Y6I8 212 aa7.62□□□□□ -1.19
VPS53-207ENST00000570510 A0A087WTM6 91 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 H0YIZ8 118 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 MRPS12O15235 138 aaKnown RBP7.61□□□□□ -1.19
VPS53-207ENST00000570510 GIPP09681 153 aaPredicted RBP7.61□□□□□ -1.19
VPS53-207ENST00000570510 AZU1P20160 251 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 PATE2Q6UY27 113 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 THAP6Q8TBB0 222 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 TMEM37Q8WXS4 190 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 MRPL53Q96EL3 112 aaKnown RBP7.61□□□□□ -1.19
VPS53-207ENST00000570510 ATP5SQ99766 215 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 NPCDR1Q9BY65 106 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 SLC25A22Q9H936 323 aa7.61□□□□□ -1.19
VPS53-207ENST00000570510 NOP10Q9NPE3 64 aaKnown RBP7.61□□□□□ -1.19
VPS53-207ENST00000570510 TRAV9-2A0A087WT02 112 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 IGLV5-52A0A0A0MRZ9 124 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 SIX6O95475 246 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 FGF7P21781 194 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 RPL12P30050 165 aaKnown RBP7.6□□□□□ -1.19
VPS53-207ENST00000570510 ZNF266Q14584 549 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 BAP18Q8IXM2 172 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 TMEM70Q9BUB7 260 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 MRPL32Q9BYC8 188 aaKnown RBP7.6□□□□□ -1.19
VPS53-207ENST00000570510 WDR61Q9GZS3 305 aaKnown RBP7.6□□□□□ -1.19
VPS53-207ENST00000570510 OR5AC2Q9NZP5 309 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 PRELID1Q9Y255 219 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 HSPB11Q9Y547 144 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 ALG5Q9Y673 324 aa7.6□□□□□ -1.19
VPS53-207ENST00000570510 TRAV12-2A0A075B6T6 113 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 UBE2L5PA0A1B0GUS4 154 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 CXCL3P19876 107 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 TAS2R60P59551 318 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 NHLH2Q02577 135 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 TMEM256Q8N2U0 113 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 OR11H7Q8NGC8 314 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 ZNF331Q9NQX6 463 aaPredicted RBP7.59□□□□□ -1.19
VPS53-207ENST00000570510 TIMM9Q9Y5J7 89 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 TNFRSF18Q9Y5U5 241 aa7.59□□□□□ -1.19
VPS53-207ENST00000570510 H3BNG1 76 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 HIST1H1EP10412 219 aaKnown RBP7.58□□□□□ -1.2
VPS53-207ENST00000570510 CNN1P51911 297 aaKnown RBP7.58□□□□□ -1.2
VPS53-207ENST00000570510 RHOBP62745 196 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 PSG3Q16557 428 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 LRRC37A5PQ49AS3 106 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 MIC13Q5XKP0 118 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 ZNF493Q6ZR52 646 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 ARL6IP6Q8N6S5 226 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 LRRC20Q8TCA0 184 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 SCGB1C1Q8TD33 95 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 AQP10Q96PS8 301 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 ODF3Q96PU9 254 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 C20orf144Q9BQM9 153 aa7.58□□□□□ -1.2
VPS53-207ENST00000570510 GAGE12BA1L429 117 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 PLAC8L1A1L4L8 177 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 NPIPB6E9PJ23 425 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 GAGE7O76087 117 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 GAGE12FP0CL80 117 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 GAGE12GP0CL81 117 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 GAGE12IP0CL82 117 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 LINC01559Q495D7 138 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 CCDC28AQ8IWP9 274 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 SAT2Q96F10 170 aaPredicted RBP7.57□□□□□ -1.2
VPS53-207ENST00000570510 MBD2Q9UBB5 411 aa7.57□□□□□ -1.2
VPS53-207ENST00000570510 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 TRBV7-9A0A0J9YWB2 115 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 CRXO43186 299 aaPredicted RBP7.56□□□□□ -1.2
VPS53-207ENST00000570510 PSCAO43653 123 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 NXPH4O95158 308 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 TAS2R45P59539 299 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 SERF2P84101 59 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 INO80EQ8NBZ0 244 aaPredicted RBP7.56□□□□□ -1.2
VPS53-207ENST00000570510 OR8A1Q8NGG7 326 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
VPS53-207ENST00000570510 C20orf173Q96LM9 149 aa7.56□□□□□ -1.2
VPS53-207ENST00000570510 PSMG3Q9BT73 122 aaPredicted RBP7.56□□□□□ -1.2
VPS53-207ENST00000570510 TRBV19A0A075B6N1 114 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 SNURFLB1AK76 121 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 BOLA2-SMG1P6H3BVE0 249 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 MBP02144 154 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 NMBP08949 121 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 HOXA5P20719 270 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 LINC00528Q8N1L1 170 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 ZNF738Q8NE65 137 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 OR2G3Q8NGZ4 309 aa7.55□□□□□ -1.2
VPS53-207ENST00000570510 MSRB1Q9NZV6 116 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms