RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 Q86TA4 180 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 APRG1Q8IVJ8 170 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 TMEM75Q8N9X5 138 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 OR8A1Q8NGG7 326 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 C11orf52Q96A22 123 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 C20orf173Q96LM9 149 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 PRR25Q96S07 402 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 RARRES2Q99969 163 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 FAM110AQ9BQ89 295 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 HLA-DRB4X5D2U9 266 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 KNCNA6PVL3 124 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 F6UB75 175 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 NDUFS6O75380 124 aaKnown RBP4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 IGKV3-20P01619 116 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 SFTA3P0C7M3 94 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 CT45A10P0DMU9 189 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 PRB4P10163 310 aaPredicted RBP4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 LEPP41159 167 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 GNG4P50150 75 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 NUTF2P61970 127 aaKnown RBP4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 FLI1Q01543 452 aaPredicted RBP4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 EGFEM1PQ0D2K5 195 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 PRNTQ86SH4 94 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 CCDC28AQ8IWP9 274 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 Q8TAT8 98 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 SMIM7Q9BQ49 75 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 SLC35B3Q9H1N7 401 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 PARLQ9H300 379 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 SAV1Q9H4B6 383 aaPredicted RBP4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 TUBA4BQ9H853 241 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 SRD5A3Q9H8P0 318 aa4.9□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRAV8-1A0A0A6YYK1 113 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRAV34A0A0B4J273 112 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 A0A0J9YX75 114 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF727A8MUV8 499 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 NPIPB6E9PJ23 425 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF561-AS1K7EIQ3 104 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 PAX4O43316 350 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF705DP0CH99 300 aaPredicted RBP4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF705BP0CI00 300 aaPredicted RBP4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 TSPOP30536 169 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 RPL35P42766 123 aaKnown RBP4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF138P52744 262 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 CENPWQ5EE01 88 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 SOHLH1Q5JUK2 328 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 SAPCD1Q5SSQ6 148 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 DEFB125Q8N687 156 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 C2CD4CQ8TF44 421 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 LINC00477Q96M19 166 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 NIPSNAP3BQ9BS92 247 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 WFDC10AQ9H1F0 79 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 PSG8Q9UQ74 426 aa4.89□□□□□ -1.63
CTDNEP1-204ENST00000570484 C9JCJ5 164 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 PRAC2D3DTV9 90 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 F8W036 122 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 H3BMM0 161 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 J3KRW8 73 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 INSP01308 110 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 AMBPP02760 352 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 SRP19P09132 144 aaKnown RBP4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 MGST1P10620 155 aaKnown RBP4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 RPL35AP18077 110 aaKnown RBP4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 APOC4P55056 127 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 TAS2R60P59551 318 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 DEFB1P60022 68 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 SRSF3P84103 164 aaKnown RBP4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 ERCC8Q13216 396 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZNF124Q15973 351 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 TMEM183BQ1AE95 376 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 FAM74A3Q4VXF1 159 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 GDF5OSQ5U4N7 250 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 C9orf47Q6ZRZ4 202 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 BAGE2Q86Y30 109 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 EIF4E3Q8N5X7 224 aaKnown RBP4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 SMIM12Q96EX1 92 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 SGK494Q96LW2 274 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 ODF3Q96PU9 254 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 VGLL1Q99990 258 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 DERL1Q9BUN8 251 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 BIN3Q9NQY0 253 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 ZFP30Q9Y2G7 519 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 TENM1Q9UKZ4 2725 aa4.88□□□□□ -1.63
CTDNEP1-204ENST00000570484 LOC102724200A0A096LPH7 203 aaPredicted RBP4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRBV7-9A0A0J9YWB2 115 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 TRBV6-1A0A0K0K1D8 114 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 M0R2Z0 102 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 CA1P00915 261 aaPredicted RBP4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 LTAP01374 205 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 GPX1P07203 203 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 IGHV4-30-4P0DP06 118 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 CDKN1BP46527 198 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 KRTAP10-11P60412 298 aa4.87□□□□□ -1.63
CTDNEP1-204ENST00000570484 ADIRFQ15847 76 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms