RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 PEF1Q9UBV8 284 aaKnown RBP9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 D6R8Y8 96 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 IGKV3-20P01619 116 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 BCL6BQ8N143 479 aaPredicted RBP9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 MLST8Q9BVC4 326 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 YAE1D1Q9NRH1 226 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 J3QLI3 93 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 M0R381 172 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 HTN1P15515 57 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 RNASE4P34096 147 aaKnown RBP9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 LINC00322Q6ZN03 302 aaPredicted RBP9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 IL17RELQ6ZVW7 336 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 GTSF1Q8WW33 167 aa9.06□□□□□ -0.96
PDXDC1-217ENST00000570001 DEFB112Q30KQ8 113 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 DUX5Q96PT3 197 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 DMXL2Q8TDJ6 3036 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 C19orf71A6NCJ1 209 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 OR4C46A6NHA9 309 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 ASIPP42127 132 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 FBLN7Q53RD9 439 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 H3BUA1 57 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 SAMD13Q5VXD3 122 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 AMN1Q8IY45 258 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 NBEAQ8NFP9 2946 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 TRAV21A0A0B4J279 112 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 FAM159AQ6UWV7 190 aa9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 POLR3KQ9Y2Y1 108 aaPredicted RBP9.05□□□□□ -0.96
PDXDC1-217ENST00000570001 LBHQ53QV2 105 aaPredicted RBP9.04□□□□□ -0.96
PDXDC1-217ENST00000570001 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
PDXDC1-217ENST00000570001 USP9YO00507 2555 aaPredicted RBP9.04□□□□□ -0.96
PDXDC1-217ENST00000570001 MBD6Q96DN6 1003 aa9.04□□□□□ -0.96
PDXDC1-217ENST00000570001 MIEN1Q9BRT3 115 aa9.04□□□□□ -0.96
PDXDC1-217ENST00000570001 LINC00477Q96M19 166 aa9.04□□□□□ -0.96
PDXDC1-217ENST00000570001 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 TRBV6-1A0A0K0K1D8 114 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 NCR2O95944 276 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 EGR2P11161 476 aaPredicted RBP9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 C14orf144Q96I85 54 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 PPBPP02775 128 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 CYB5R2Q6BCY4 276 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 BEX4Q9NWD9 120 aaPredicted RBP9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 H3BVH4 76 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 TMEM95Q3KNT9 176 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 Q96MF0 132 aa9.03□□□□□ -0.96
PDXDC1-217ENST00000570001 IGHG2P01859 326 aa9.02□□□□□ -0.96
PDXDC1-217ENST00000570001 CTAG1AP78358 180 aa9.02□□□□□ -0.96
PDXDC1-217ENST00000570001 ARL6IP6Q8N6S5 226 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 ZNF418Q8TF45 676 aaPredicted RBP9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 LRRK2Q5S007 2527 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 A6NDX4 124 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 G0S2P27469 103 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 TSPOP30536 169 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 AGPAT4-IT1Q9H0P7 198 aa9.02□□□□□ -0.97
PDXDC1-217ENST00000570001 RPLP1P05386 114 aaKnown RBP9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 TRAV9-2A0A087WT02 112 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 A0A1B0GV90 55 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 KLF5Q13887 457 aaPredicted RBP9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 C18orf15Q96N68 181 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 PMCHL2Q9BQD1 86 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 KLK15Q9H2R5 256 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 PTPN13Q12923 2485 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 DOPEY1Q5JWR5 2465 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 TCTAP57738 103 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 PSMG4Q5JS54 123 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 WFDC12Q8WWY7 111 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 ZNF688P0C7X2 276 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 EVI2AP22794 236 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 ATP6V0BQ99437 205 aa9.01□□□□□ -0.97
PDXDC1-217ENST00000570001 ZNF462Q96JM2 2506 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 RBAKDNA6NC62 111 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 PRAC2D3DTV9 90 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 PF4P02776 101 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 CACNG7P62955 275 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 HBDP02042 147 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 ESDP10768 282 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
PDXDC1-217ENST00000570001 DEFB113Q30KQ7 82 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 PET117Q6UWS5 81 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 IGHV7-4-1A0A0J9YVY3 117 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 A0A1B0GXF2 115 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 IGLV2-11P01706 119 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 SYNJ2BPP57105 145 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 GDF5OSQ5U4N7 250 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 SLC25A34Q6PIV7 304 aa9□□□□□ -0.97
PDXDC1-217ENST00000570001 MRPL53Q96EL3 112 aaKnown RBP9□□□□□ -0.97
PDXDC1-217ENST00000570001 NUDT3O95989 172 aa8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 TRBV12-3P01733 135 aa8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 COL5A1-AS1Q5SY13 56 aa8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 ZFAND3Q9H8U3 227 aa8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 TCF21O43680 179 aa8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
PDXDC1-217ENST00000570001 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms