RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
HERPUD1-218ENST00000569569 NIPSNAP3BQ9BS92 247 aa9.87□□□□□ -0.83
HERPUD1-218ENST00000569569 Q9H3A6 140 aa9.87□□□□□ -0.83
HERPUD1-218ENST00000569569 TAAR5O14804 337 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 ARPC5O15511 151 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 EIF3GO75821 320 aaKnown RBP eCLIP9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 HTN1P15515 57 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 AZU1P20160 251 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 CDC34P49427 236 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 TMEM78Q5T7P6 136 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 GNPNAT1Q96EK6 184 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 ALMS1Q8TCU4 4167 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
HERPUD1-218ENST00000569569 IGKV2-40A0A087WW87 121 aaPredicted RBP9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 LYRM9A8MSI8 78 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 J3KRW8 73 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 HMGB3O15347 200 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 LY6G6CO95867 125 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 IGKV2D-40P01614 121 aaPredicted RBP9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 SLC25A5P05141 298 aaKnown RBP9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 STAG3L2P0CL84 134 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 STAG3L3P0CL85 134 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 ZNF493Q6ZR52 646 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 RXFP4Q8TDU9 374 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 FAM19A4Q96LR4 140 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 VGLL1Q99990 258 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 APLNQ9ULZ1 77 aa9.85□□□□□ -0.83
HERPUD1-218ENST00000569569 TRAV12-3A0A0B4J271 114 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 PLAC8L1A1L4L8 177 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 RBAKDNA6NC62 111 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 PGPA6NDG6 321 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 KLLNB2CW77 178 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 SMLR1H3BR10 107 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 NMBP08949 121 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 CRISP2P16562 243 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 DAD1P61803 113 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 FAM74A1Q5RGS3 127 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 RAB24Q969Q5 203 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 ACTR3CQ9C0K3 210 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 OTORQ9NRC9 128 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 ZNF492Q9P255 531 aa9.84□□□□□ -0.83
HERPUD1-218ENST00000569569 RYR2Q92736 4967 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 IGHV4-4A0A075B6R2 117 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 TRBV7-9A0A0J9YWB2 115 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 C7orf71A4D174 169 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 DIRC3C9JPN6 131 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 GPX1P07203 203 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 LGALS9CQ6DKI2 356 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 CCDC28AQ8IWP9 274 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 CMTM2Q8TAZ6 248 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 RNASE8Q8TDE3 154 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 PYGO2Q9BRQ0 406 aa9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 TIMM8BQ9Y5J9 83 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-218ENST00000569569 HMSDA8MTL9 139 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 ZNF324O75467 553 aaPredicted RBP9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 ZNF138P52744 262 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 ARL6IP6Q8N6S5 226 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 HYLS1Q96M11 299 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 CYTL1Q9NRR1 136 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 HYDINQ4G0P3 5121 aa9.82□□□□□ -0.84
HERPUD1-218ENST00000569569 CXorf1O96002 111 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 GCHFRP30047 84 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 RNASE4P34096 147 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 CD300CQ08708 224 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 BTN1A1Q13410 526 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 ZNF345Q14585 488 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 KCNRGQ8N5I3 272 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 ZFAND2AQ8N6M9 145 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 OR11H4Q8NGC9 324 aa9.81□□□□□ -0.84
HERPUD1-218ENST00000569569 DEFB130BP0DP73 79 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 DEFB130AP0DP74 79 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 AKR1C8PQ5T2L2 129 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 TMED6Q8WW62 240 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 FAM210BQ96KR6 192 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 ARPC5LQ9BPX5 153 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 NDUFAF3Q9BU61 184 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 TMEM167BQ9NRX6 74 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
HERPUD1-218ENST00000569569 A0A0D9SG52 128 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 CTXND1A0A1B0GTU2 59 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 SNURFLB1AK76 121 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 HTN3P15516 51 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 EIF4E3Q8N5X7 224 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 Q8TAT8 98 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 ST6GAL2Q96JF0 529 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 LINC00467Q9BRT7 94 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 RPH3ALQ9UNE2 315 aa9.79□□□□□ -0.84
HERPUD1-218ENST00000569569 KMT2AQ03164 3969 aa9.78□□□□□ -0.84
HERPUD1-218ENST00000569569 CBY3A6NI87 242 aa9.78□□□□□ -0.84
HERPUD1-218ENST00000569569 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
HERPUD1-218ENST00000569569 PRR9Q5T870 116 aa9.78□□□□□ -0.84
HERPUD1-218ENST00000569569 GOLT1AQ6ZVE7 132 aa9.78□□□□□ -0.84
HERPUD1-218ENST00000569569 ZNF680Q8NEM1 530 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms