RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TNFRSF18Q9Y5U5 241 aa10.64□□□□□ -0.71
NME3-211ENST00000568561 UBE2L5PA0A1B0GUS4 154 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 FAM24AA6NFZ4 105 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 FAM25EA8MYX2 175 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 SIVA1O15304 175 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 GUK1Q16774 197 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 ZNF680Q8NEM1 530 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 OR1L4Q8NGR5 311 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 C20orf85Q9H1P6 137 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 NUDT15Q9NV35 164 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 UQCC1Q9NVA1 299 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 WDR83OSQ9Y284 106 aa10.63□□□□□ -0.71
NME3-211ENST00000568561 TRBV19A0A075B6N1 114 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 EPM2AB3EWF7 344 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 NXPH4O95158 308 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 NDUFB4O95168 129 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 SLC25A5P05141 298 aaKnown RBP10.62□□□□□ -0.71
NME3-211ENST00000568561 H2AFB2P0C5Z0 115 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 PYYP10082 97 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 RNASE4P34096 147 aaKnown RBP10.62□□□□□ -0.71
NME3-211ENST00000568561 RAB31Q13636 194 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 PRR9Q5T870 116 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 Q6ZNX1 250 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 Q6ZQT7 251 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 AGPAT4-IT1Q9H0P7 198 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 MRPL16Q9NX20 251 aaKnown RBP10.62□□□□□ -0.71
NME3-211ENST00000568561 TP53TG3Q9ULZ0 132 aa10.62□□□□□ -0.71
NME3-211ENST00000568561 TRAV6A0A075B6T7 132 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
NME3-211ENST00000568561 KLLNB2CW77 178 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 INMT-MINDY4F8WBC2 141 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 ZNF324O75467 553 aaPredicted RBP10.61□□□□□ -0.71
NME3-211ENST00000568561 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
NME3-211ENST00000568561 DNAH10OSP0CZ25 163 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 BAXQ07812 192 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 EXOC3-AS1Q8N2X6 119 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 EIF4E3Q8N5X7 224 aaKnown RBP10.61□□□□□ -0.71
NME3-211ENST00000568561 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 PFDN5Q99471 154 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 SLC39A9Q9NUM3 307 aa10.61□□□□□ -0.71
NME3-211ENST00000568561 IGSF23A1L1A6 192 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 PAX4O43316 350 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 SPINK4O60575 86 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 ZNF253O75346 499 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 TCL1AP56279 114 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 S100A10P60903 97 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
NME3-211ENST00000568561 C18orf15Q96N68 181 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 SEC22CQ9BRL7 303 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 ICOSQ9Y6W8 199 aa10.6□□□□□ -0.71
NME3-211ENST00000568561 C5orf51A6NDU8 294 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 MPDU1O75352 247 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 GPX1P07203 203 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 VWC2Q2TAL6 325 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 ANXA2RQ3ZCQ2 193 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 ST6GAL2Q96JF0 529 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 C8orf49Q96NF6 230 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 LINC00467Q9BRT7 94 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 TIMM9Q9Y5J7 89 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 MYCBP2O75592 4640 aa10.59□□□□□ -0.71
NME3-211ENST00000568561 VPS13BQ7Z7G8 4022 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 PRAF2O60831 178 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 HIST1H1EP10412 219 aaKnown RBP10.58□□□□□ -0.72
NME3-211ENST00000568561 FGF7P21781 194 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 RPL29P47914 159 aaKnown RBP10.58□□□□□ -0.72
NME3-211ENST00000568561 FAM122CQ6P4D5 195 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 ZFAND2AQ8N6M9 145 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 VGLL1Q99990 258 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 TMEM14CQ9P0S9 112 aa10.58□□□□□ -0.72
NME3-211ENST00000568561 FLG2Q5D862 2391 aaPredicted RBP10.58□□□□□ -0.72
NME3-211ENST00000568561 RGS13O14921 159 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 CRISP2P16562 243 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 SULT1A1P50225 295 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 XGP55808 180 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 ICAM4Q14773 271 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 C12orf45Q8N5I9 185 aaPredicted RBP10.57□□□□□ -0.72
NME3-211ENST00000568561 Q8TAT8 98 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 LINC00477Q96M19 166 aa10.57□□□□□ -0.72
NME3-211ENST00000568561 LYRM2Q9NU23 88 aaPredicted RBP10.57□□□□□ -0.72
NME3-211ENST00000568561 IGHV1OR15-1A0A075B7D0 117 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 EREGO14944 169 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 INAFM2P0DMQ5 153 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 CRYBA4P53673 196 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 KRTAP10-1P60331 282 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
NME3-211ENST00000568561 LYPD5Q6UWN5 251 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 C9orf47Q6ZRZ4 202 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 TMEM252Q8N6L7 170 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 ARPC5LQ9BPX5 153 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 SLC25A2Q9BXI2 301 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 PGPEP1Q9NXJ5 209 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 PRELID1Q9Y255 219 aa10.56□□□□□ -0.72
NME3-211ENST00000568561 PVALBP20472 110 aaPredicted RBP10.55□□□□□ -0.72
NME3-211ENST00000568561 RAB32Q13637 225 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms