RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 NIPSNAP3BQ9BS92 247 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 SH3BGRL3Q9H299 93 aa6.75□□□□□ -1.33
SF3B3-211ENST00000568291 MUC4Q99102 2169 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 TMEM189A5PLL7 270 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 RNF222A6NCQ9 220 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 G3V3Q6 166 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 GIPP09681 153 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-211ENST00000568291 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 DAD1P61803 113 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 UBE2L3P68036 154 aaKnown RBP6.74□□□□□ -1.33
SF3B3-211ENST00000568291 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 PRR9Q5T870 116 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 RPL7L1Q6DKI1 246 aaKnown RBP6.74□□□□□ -1.33
SF3B3-211ENST00000568291 OR10G4Q8NGN3 311 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 OR10G9Q8NGN4 311 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 OR10G7Q8NGN6 311 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 AQP10Q96PS8 301 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 MRPL32Q9BYC8 188 aaKnown RBP6.74□□□□□ -1.33
SF3B3-211ENST00000568291 AAMDCQ9H7C9 122 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 KCNIP2Q9NS61 270 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 RPH3ALQ9UNE2 315 aa6.74□□□□□ -1.33
SF3B3-211ENST00000568291 PCLOQ9Y6V0 5065 aa6.73□□□□□ -1.33
SF3B3-211ENST00000568291 A0A1W2PPV4 95 aa6.73□□□□□ -1.33
SF3B3-211ENST00000568291 ZNF253O75346 499 aa6.73□□□□□ -1.33
SF3B3-211ENST00000568291 TAS2R60P59551 318 aa6.73□□□□□ -1.33
SF3B3-211ENST00000568291 ACOT6Q3I5F7 207 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-211ENST00000568291 Q9H3A6 140 aa6.73□□□□□ -1.33
SF3B3-211ENST00000568291 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
SF3B3-211ENST00000568291 PGPA6NDG6 321 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 ARPC5O15511 151 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 M6PRP20645 277 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 TSPOP30536 169 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 LEPP41159 167 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 GNG5P63218 68 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 PDE6HQ13956 83 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 SSX7Q7RTT5 188 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 INO80EQ8NBZ0 244 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-211ENST00000568291 MRPL53Q96EL3 112 aaKnown RBP6.72□□□□□ -1.33
SF3B3-211ENST00000568291 SGK494Q96LW2 274 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 TNFSF18Q9UNG2 199 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 PRELID1Q9Y255 219 aa6.72□□□□□ -1.33
SF3B3-211ENST00000568291 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 C7orf71A4D174 169 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 H7BYZ3 331 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 GAGE7O76087 117 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 GPX1P07203 203 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 ARL14EPLP0DKL9 152 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 KHDC3LQ587J8 217 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 TMEM78Q5T7P6 136 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 TMEM88Q6PEY1 159 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 C9orf47Q6ZRZ4 202 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 LINC00336Q6ZUF6 198 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 TMEM256Q8N2U0 113 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
SF3B3-211ENST00000568291 RAB24Q969Q5 203 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 FAM19A4Q96LR4 140 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 LINC00477Q96M19 166 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 TP53TG3Q9ULZ0 132 aa6.71□□□□□ -1.34
SF3B3-211ENST00000568291 TRAV8-1A0A0A6YYK1 113 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 F5H768 121 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 ZNF324O75467 553 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-211ENST00000568291 CSN1S1P47710 185 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 TAS2R45P59539 299 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 ZNF266Q14584 549 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 MUC21Q5SSG8 566 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 CCDC28AQ8IWP9 274 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 IQCF2Q8IXL9 164 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 ZFAND2AQ8N6M9 145 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 OR11H4Q8NGC9 324 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 C16orf74Q96GX8 76 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 NDUFAF3Q9BU61 184 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 GSN-AS1Q9NRJ2 163 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 ZNF492Q9P255 531 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 TIMM8BQ9Y5J9 83 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-211ENST00000568291 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
SF3B3-211ENST00000568291 A0A1B0GVY2 172 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 CBY3A6NI87 242 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 LYRM9A8MSI8 78 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 KLLNB2CW77 178 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 DIRC3C9JPN6 131 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 M0R2N4 97 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 SLC25A5P05141 298 aaKnown RBP6.69□□□□□ -1.34
SF3B3-211ENST00000568291 CDC34P49427 236 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-211ENST00000568291 ZNF138P52744 262 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 GOLT1AQ6ZVE7 132 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 OR2G3Q8NGZ4 309 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 ODF3Q96PU9 254 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 CYTL1Q9NRR1 136 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 KLF12Q9Y4X4 402 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 KIAA1109Q2LD37 5005 aa6.69□□□□□ -1.34
SF3B3-211ENST00000568291 BORCS7-ASMTA0A0B4J1R7 106 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 STAG3L2P0CL84 134 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 STAG3L3P0CL85 134 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 GCHFRP30047 84 aa6.68□□□□□ -1.34
SF3B3-211ENST00000568291 FGF8P55075 233 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms