RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 SULT1A4P0DMN0 295 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 CCR6P51684 374 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 UBE2MP61081 183 aaKnown RBP7.78□□□□□ -1.16
CLK3-222ENST00000568232 CD300CQ08708 224 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 RNASE10Q5GAN6 216 aaKnown RBP7.78□□□□□ -1.16
CLK3-222ENST00000568232 GGNBP1Q5YKI7 109 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 LRRC20Q8TCA0 184 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 ZFAND1Q8TCF1 268 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
CLK3-222ENST00000568232 K7EQD1 137 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 CFDP00746 253 aaPredicted RBP7.77□□□□□ -1.17
CLK3-222ENST00000568232 RAP2BP61225 183 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 ZNF415Q09FC8 603 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 FHL2Q14192 279 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 C10orf126Q8N4M7 172 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 LRTM2Q8N967 370 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 BPIFCQ8NFQ6 507 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 CIRBP-AS1Q8TBR5 109 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 HSPB7Q9UBY9 170 aa7.77□□□□□ -1.17
CLK3-222ENST00000568232 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.76□□□□□ -1.17
CLK3-222ENST00000568232 LECT2O14960 151 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 RS1O15537 224 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 SPINK4O60575 86 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 B3GALNT1O75752 331 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 GIPP09681 153 aaPredicted RBP7.76□□□□□ -1.17
CLK3-222ENST00000568232 SRIP30626 198 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 CTAG1AP78358 180 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 SCGB2B2Q4G0G5 96 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 TERB2Q8NHR7 220 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 ZNF431Q8TF32 576 aaPredicted RBP7.76□□□□□ -1.17
CLK3-222ENST00000568232 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
CLK3-222ENST00000568232 PYGO2Q9BRQ0 406 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 RTBDNQ9BSG5 229 aaPredicted RBP7.76□□□□□ -1.17
CLK3-222ENST00000568232 SHANK2-AS3Q9BTD1 123 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 NAA60Q9H7X0 242 aa7.76□□□□□ -1.17
CLK3-222ENST00000568232 A0A087X0K7 114 aa7.75□□□□□ -1.17
CLK3-222ENST00000568232 IBA57-AS1B1ANH7 110 aa7.75□□□□□ -1.17
CLK3-222ENST00000568232 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
CLK3-222ENST00000568232 IGLV2-8P01709 118 aa7.75□□□□□ -1.17
CLK3-222ENST00000568232 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
CLK3-222ENST00000568232 RPL7P18124 248 aaKnown RBP7.75□□□□□ -1.17
CLK3-222ENST00000568232 SURF2Q15527 256 aaPredicted RBP7.75□□□□□ -1.17
CLK3-222ENST00000568232 OR51S1Q8NGJ8 323 aa7.75□□□□□ -1.17
CLK3-222ENST00000568232 DNAJC4Q9NNZ3 241 aa7.75□□□□□ -1.17
CLK3-222ENST00000568232 MRPL16Q9NX20 251 aaKnown RBP7.75□□□□□ -1.17
CLK3-222ENST00000568232 PMS2P5A8MQ11 134 aa7.74□□□□□ -1.17
CLK3-222ENST00000568232 GYPEP15421 78 aa7.74□□□□□ -1.17
CLK3-222ENST00000568232 S100A1P23297 94 aa7.74□□□□□ -1.17
CLK3-222ENST00000568232 TEPPQ6URK8 271 aa7.74□□□□□ -1.17
CLK3-222ENST00000568232 OR1S1Q8NH92 325 aa7.74□□□□□ -1.17
CLK3-222ENST00000568232 MRPL32Q9BYC8 188 aaKnown RBP7.74□□□□□ -1.17
CLK3-222ENST00000568232 HIGD1AQ9Y241 93 aa7.74□□□□□ -1.17
CLK3-222ENST00000568232 TRAV5A0A0B4J249 113 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 PIGBOS1A0A0B4J2F0 54 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 H3BTX0 84 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 IAPPP10997 89 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 ATP5IP56385 69 aaPredicted RBP7.73□□□□□ -1.17
CLK3-222ENST00000568232 SLAQ13239 276 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 SMCO1Q147U7 214 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 ZNF680Q8NEM1 530 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 ZNF331Q9NQX6 463 aaPredicted RBP7.73□□□□□ -1.17
CLK3-222ENST00000568232 MGAT4CQ9UBM8 478 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 TP53TG3Q9ULZ0 132 aa7.73□□□□□ -1.17
CLK3-222ENST00000568232 A0A0B4J2A0 478 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 CRYM-AS1A6NIL9 109 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 PRSS46E5RG02 174 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 MRPS12O15235 138 aaKnown RBP7.72□□□□□ -1.17
CLK3-222ENST00000568232 OR5G3P0C626 314 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 OR4E1P0C645 316 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 SFTA3P0C7M3 94 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 S100A7P31151 101 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 LEPP41159 167 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 TCL1AP56279 114 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 RPL37AP61513 92 aaKnown RBP7.72□□□□□ -1.17
CLK3-222ENST00000568232 RAB11AP62491 216 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 CYCSP99999 105 aaKnown RBP7.72□□□□□ -1.17
CLK3-222ENST00000568232 LYZL2Q7Z4W2 148 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 C12orf45Q8N5I9 185 aaPredicted RBP7.72□□□□□ -1.17
CLK3-222ENST00000568232 OR2T35Q8NGX2 323 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 VGLL1Q99990 258 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 SHPKQ9UHJ6 478 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 GPR132Q9UNW8 380 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 FLVCR2Q9UPI3 526 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 C14orf166Q9Y224 244 aaKnown RBP7.72□□□□□ -1.17
CLK3-222ENST00000568232 HSPB11Q9Y547 144 aa7.72□□□□□ -1.17
CLK3-222ENST00000568232 SLC17A3O00476 420 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 ATP6V1G1O75348 118 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 HYPMO75409 117 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 ANXA7P20073 488 aaKnown RBP7.71□□□□□ -1.18
CLK3-222ENST00000568232 NKX2-5P52952 324 aaPredicted RBP7.71□□□□□ -1.18
CLK3-222ENST00000568232 ANXA2RQ3ZCQ2 193 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 TMEM128Q5BJH2 165 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 LINC01556Q5JQF7 62 aa7.71□□□□□ -1.18
CLK3-222ENST00000568232 EIF4E3Q8N5X7 224 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms