RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 TMEM14CQ9P0S9 112 aa12.93□□□□□ -0.34
ABCA3-204ENST00000566200 TRAV6A0A075B6T7 132 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 C5orf51A6NDU8 294 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 PYYP10082 97 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 TMEM252Q8N6L7 170 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 C2orf50Q96LR7 162 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 SCRT2Q9NQ03 307 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 LYRM2Q9NU23 88 aaPredicted RBP12.92□□□□□ -0.34
ABCA3-204ENST00000566200 KLF12Q9Y4X4 402 aa12.92□□□□□ -0.34
ABCA3-204ENST00000566200 TRGV2A0A075B6R0 118 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
ABCA3-204ENST00000566200 SULT1A1P50225 295 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 LINC00315P59091 139 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 BAXQ07812 192 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 ANXA2RQ3ZCQ2 193 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 GCSAMLQ5JQS6 135 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 PRR9Q5T870 116 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 Q6ZQT7 251 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 EXOC3-AS1Q8N2X6 119 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 ZNF680Q8NEM1 530 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 NUDT15Q9NV35 164 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 FUT9Q9Y231 359 aa12.91□□□□□ -0.34
ABCA3-204ENST00000566200 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 SPINK4O60575 86 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 CRISP2P16562 243 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 S100A11P31949 105 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 RAB32Q13637 225 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 C12orf45Q8N5I9 185 aaPredicted RBP12.9□□□□□ -0.34
ABCA3-204ENST00000566200 EIF4E3Q8N5X7 224 aaKnown RBP12.9□□□□□ -0.34
ABCA3-204ENST00000566200 LINC00477Q96M19 166 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 TP53TG3Q9ULZ0 132 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
ABCA3-204ENST00000566200 FGF7P21781 194 aa12.89□□□□□ -0.35
ABCA3-204ENST00000566200 RNASE4P34096 147 aaKnown RBP12.89□□□□□ -0.35
ABCA3-204ENST00000566200 TCL1AP56279 114 aa12.89□□□□□ -0.35
ABCA3-204ENST00000566200 S100A10P60903 97 aa12.89□□□□□ -0.35
ABCA3-204ENST00000566200 C9orf47Q6ZRZ4 202 aa12.89□□□□□ -0.35
ABCA3-204ENST00000566200 ZFAND2AQ8N6M9 145 aa12.89□□□□□ -0.35
ABCA3-204ENST00000566200 BLNKQ8WV28 456 aa12.89□□□□□ -0.35
ABCA3-204ENST00000566200 IGKV2-40A0A087WW87 121 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-204ENST00000566200 IGKV2D-40P01614 121 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-204ENST00000566200 PVALBP20472 110 aaPredicted RBP12.88□□□□□ -0.35
ABCA3-204ENST00000566200 PDE6HQ13956 83 aa12.88□□□□□ -0.35
ABCA3-204ENST00000566200 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
ABCA3-204ENST00000566200 VGLL1Q99990 258 aa12.88□□□□□ -0.35
ABCA3-204ENST00000566200 SLC25A2Q9BXI2 301 aa12.88□□□□□ -0.35
ABCA3-204ENST00000566200 TIMM9Q9Y5J7 89 aa12.88□□□□□ -0.35
ABCA3-204ENST00000566200 ICAM4Q14773 271 aa12.87□□□□□ -0.35
ABCA3-204ENST00000566200 SIVA1O15304 175 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 MPDU1O75352 247 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 IGHV3-53P01767 116 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 GPX1P07203 203 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 FUSP35637 526 aaKnown RBP eCLIP12.86□□□□□ -0.35
ABCA3-204ENST00000566200 HBG1P69891 147 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 HBG2P69892 147 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 IBA57Q5T440 356 aaKnown RBP12.86□□□□□ -0.35
ABCA3-204ENST00000566200 MIR17HGQ75NE6 70 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 STX12Q86Y82 276 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 ST6GAL2Q96JF0 529 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 MRPL16Q9NX20 251 aaKnown RBP12.86□□□□□ -0.35
ABCA3-204ENST00000566200 TNFRSF18Q9Y5U5 241 aa12.86□□□□□ -0.35
ABCA3-204ENST00000566200 PAX4O43316 350 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 NXPH4O95158 308 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 NMBP08949 121 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 H2AFB2P0C5Z0 115 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 ATP6V1FQ16864 119 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 FAM122CQ6P4D5 195 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 GPN1Q9HCN4 374 aaPredicted RBP12.85□□□□□ -0.35
ABCA3-204ENST00000566200 ZNF492Q9P255 531 aa12.85□□□□□ -0.35
ABCA3-204ENST00000566200 NHLH2Q02577 135 aa12.84□□□□□ -0.35
ABCA3-204ENST00000566200 THAP6Q8TBB0 222 aa12.84□□□□□ -0.35
ABCA3-204ENST00000566200 AAMDCQ9H7C9 122 aa12.84□□□□□ -0.35
ABCA3-204ENST00000566200 ICOSQ9Y6W8 199 aa12.84□□□□□ -0.35
ABCA3-204ENST00000566200 IGHV1OR15-1A0A075B7D0 117 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 RGS13O14921 159 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 CRYBA4P53673 196 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 FHL2Q14192 279 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 TMEM78Q5T7P6 136 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 Q8TAT8 98 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 PRO0255Q9UI72 69 aa12.83□□□□□ -0.36
ABCA3-204ENST00000566200 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
ABCA3-204ENST00000566200 LYPD5Q6UWN5 251 aa12.82□□□□□ -0.36
ABCA3-204ENST00000566200 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
ABCA3-204ENST00000566200 OR5C1Q8NGR4 320 aa12.81□□□□□ -0.36
ABCA3-204ENST00000566200 PHYHIPLQ96FC7 376 aa12.81□□□□□ -0.36
ABCA3-204ENST00000566200 C8orf49Q96NF6 230 aa12.81□□□□□ -0.36
ABCA3-204ENST00000566200 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
ABCA3-204ENST00000566200 HERC1Q15751 4861 aa12.81□□□□□ -0.36
ABCA3-204ENST00000566200 FAT1Q14517 4588 aa12.8□□□□□ -0.36
ABCA3-204ENST00000566200 PRAF2O60831 178 aa12.8□□□□□ -0.36
ABCA3-204ENST00000566200 OR10J4P0C629 311 aa12.8□□□□□ -0.36
ABCA3-204ENST00000566200 ZNF138P52744 262 aa12.8□□□□□ -0.36
ABCA3-204ENST00000566200 OR5AC2Q9NZP5 309 aa12.8□□□□□ -0.36
ABCA3-204ENST00000566200 HHLA3Q9XRX5 114 aa12.8□□□□□ -0.36
ABCA3-204ENST00000566200 XGP55808 180 aa12.79□□□□□ -0.36
ABCA3-204ENST00000566200 ARPC5LQ9BPX5 153 aa12.79□□□□□ -0.36
ABCA3-204ENST00000566200 CCDC32Q9BV29 185 aa12.79□□□□□ -0.36
ABCA3-204ENST00000566200 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
ABCA3-204ENST00000566200 MDFICQ9P1T7 246 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms