RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 RBMY1BA6NDE4 496 aaKnown RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 RBMY1EA6NEQ0 496 aaKnown RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 LINC01619G3V211 115 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 RBMY1DP0C7P1 496 aaKnown RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 RBMY1A1P0DJD3 496 aaKnown RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 RBMY1CP0DJD4 496 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 TMEM170BQ5T4T1 132 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 TMEM86BQ8N661 226 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 DNAJC13O75165 2243 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 C10orf142B7Z368 130 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 DEFB110Q30KQ9 67 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 LGALS9BQ3B8N2 356 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 LGALS9CQ6DKI2 356 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 VGLL1Q99990 258 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 RPP25Q9BUL9 199 aaKnown RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 LENEPQ9Y5L5 61 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 CXorf1O96002 111 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 CKS2P33552 79 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 SMCPP49901 116 aaPredicted RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 MFAP2P55001 183 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 LAGE3Q14657 143 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 FAM27BQ5VT28 67 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 GUSBP11Q6P575 273 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 FAM186AA6NE01 2351 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 BCE1O60756 84 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 FAM106AQ4KMX7 169 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 C2orf66Q6UXQ4 117 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 LOXP28300 417 aaPredicted RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 MYCNOSP40205 109 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 FSCN3Q9NQT6 498 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 KIAA1549Q9HCM3 1950 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 SMRP1Q8NCR6 262 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 IGHV1-45A0A0A0MS14 117 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 PRSS29PA6NIE9 313 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 PRDX2P32119 198 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 HBBP68871 147 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 ZFAND3Q9H8U3 227 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 DEPPQ9NTK1 212 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 SLC25A15Q9Y619 301 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 ORMDL2Q53FV1 153 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 SRRM4A7MD48 611 aaKnown RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 TMEM92Q6UXU6 159 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 GGNQ86UU5 652 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 BCL6BQ8N143 479 aaPredicted RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 PIFOQ8TCI5 191 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 PPDPFQ9H3Y8 114 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 SPTY2D1-AS1A0A0U1RR47 76 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 KNCNA6PVL3 124 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 ARL14EPLP0DKL9 152 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 COX6B1P14854 86 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 FAM201AQ5SY85 155 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 MIR17HGQ75NE6 70 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 NUP214P35658 2090 aaPredicted RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 PRR30Q53SZ7 412 aaPredicted RBP2.35□□□□□ -2.03
CHD9-218ENST00000566029 LINC00477Q96M19 166 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 VKORC1Q9BQB6 163 aa2.35□□□□□ -2.03
CHD9-218ENST00000566029 ARFGEF3Q5TH69 2177 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 TRBV19A0A075B6N1 114 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 A0A087WX48 190 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 GGTLC3B5MD39 225 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 COX17Q14061 63 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 C8orf31Q8N9H6 132 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 UBE2WQ96B02 151 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 IGHV1-24A0A0C4DH33 117 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 H3BMG7 143 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 TET1Q8NFU7 2136 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 CXXC4Q9H2H0 198 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 RPUSD1Q9UJJ7 312 aaKnown RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 CSDC2Q9Y534 153 aaKnown RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 IGHV3-64DA0A0J9YX35 117 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 J3QT63 122 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 RNASE2P10153 161 aaKnown RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 Q8TCH9 128 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 FXYD2P54710 66 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 PPP1R32Q7Z5V6 425 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 ZNF625Q96I27 306 aaPredicted RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 CLPSL1A2RUU4 121 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 SMIM9A6NGZ8 99 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 TCF15Q12870 199 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 KLRD1Q13241 179 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 Q6ZUT4 128 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 PRNTQ86SH4 94 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 NDUFA12Q9UI09 145 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 AHCTF1Q8WYP5 2266 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 TRBV7-3A0A075B6L6 115 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 RHODO00212 210 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 DUSP14O95147 198 aaKnown RBP2.34□□□□□ -2.03
CHD9-218ENST00000566029 LINC01587Q99440 93 aa2.34□□□□□ -2.03
CHD9-218ENST00000566029 SVILO95425 2214 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 UQCRQO14949 82 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 APOC4P55056 127 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 TRPT1Q86TN4 253 aaKnown RBP2.34□□□□□ -2.04
CHD9-218ENST00000566029 ZNF329Q86UD4 541 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 PPDPFLQ8WWR9 84 aa2.34□□□□□ -2.04
CHD9-218ENST00000566029 PRSS22Q9GZN4 317 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms