RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SPAG8Q99932 426 aaPredicted RBP14.31□□□□□ -0.12
CSPG4P13-201ENST00000565545 GCGP01275 180 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 IGLV2-8P01709 118 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 PRB2P02812 416 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 BEAN1Q3B7T3 259 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 CD300EQ496F6 205 aaPredicted RBP14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 SAPCD1Q5SSQ6 148 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 C9orf47Q6ZRZ4 202 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 PRNTQ86SH4 94 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 TMEM183AQ8IXX5 376 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 TMEM61Q8N0U2 210 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 ISOC2Q96AB3 205 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 CTDSP1Q9GZU7 261 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 RPS10P5Q9NQ39 176 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 PPP1R14DQ9NXH3 145 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 SELENOKQ9Y6D0 94 aa14.3□□□□□ -0.12
CSPG4P13-201ENST00000565545 IGKV2-40A0A087WW87 121 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 TRAV8-1A0A0A6YYK1 113 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 PGPEP1LA6NFU8 196 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 OR4C46A6NHA9 309 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 PRAC2D3DTV9 90 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 SAP30O75446 220 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 IGKV2D-40P01614 121 aaPredicted RBP14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 MT-ND4LP03901 98 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 ANAPC16Q96DE5 110 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 SGK494Q96LW2 274 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 MLST8Q9BVC4 326 aa14.29□□□□□ -0.12
CSPG4P13-201ENST00000565545 PPP1R2P9O14990 202 aa14.28□□□□□ -0.12
CSPG4P13-201ENST00000565545 TFPI2P48307 235 aa14.28□□□□□ -0.12
CSPG4P13-201ENST00000565545 OR10J6PQ8NGY7 276 aa14.28□□□□□ -0.12
CSPG4P13-201ENST00000565545 LINC00477Q96M19 166 aa14.28□□□□□ -0.12
CSPG4P13-201ENST00000565545 NDFIP1Q9BT67 221 aa14.28□□□□□ -0.12
CSPG4P13-201ENST00000565545 TMEM242Q9NWH2 141 aa14.28□□□□□ -0.12
CSPG4P13-201ENST00000565545 K7EN84 100 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 IGLV1-51P01701 117 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 INSL3P51460 131 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 TMEM78Q5T7P6 136 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 COX8CQ7Z4L0 72 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 VGLL1Q99990 258 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 LENEPQ9Y5L5 61 aa14.27□□□□□ -0.13
CSPG4P13-201ENST00000565545 NPIPB6E9PJ23 425 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 MGST1P10620 155 aaKnown RBP14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 ZNF138P52744 262 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 CMC4P56277 68 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 RNF212Q495C1 297 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 SAMD5Q5TGI4 173 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 OR8A1Q8NGG7 326 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 SFRP2Q96HF1 295 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 PRR25Q96S07 402 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 AGPAT4-IT1Q9H0P7 198 aa14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 AURKAIP1Q9NWT8 199 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P13-201ENST00000565545 ZNF688P0C7X2 276 aa14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 PSMG4Q5JS54 123 aa14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 KPRPQ5T749 579 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 FAM231DQ6ZW35 169 aa14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 C15orf54Q8N8G6 183 aa14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 MCRIP2Q9BUT9 160 aaKnown RBP14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 OSTCQ9NRP0 149 aa14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 ZNF492Q9P255 531 aa14.25□□□□□ -0.13
CSPG4P13-201ENST00000565545 TRBV7-9A0A0J9YWB2 115 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 CXorf65A6NEN9 183 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 ERVFC1-1P60608 527 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 ERCC8Q13216 396 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 FAM24BQ8N5W8 94 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 NHLRC2Q8NBF2 726 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 OR10G8Q8NGN5 311 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 MRAPQ8TCY5 172 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 SMCO4Q9NRQ5 59 aa14.24□□□□□ -0.13
CSPG4P13-201ENST00000565545 SCO1O75880 301 aa14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 DUSP14O95147 198 aaKnown RBP14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 CT45A10P0DMU9 189 aa14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 OR5I1Q13606 314 aa14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 C9orf66Q5T8R8 295 aa14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 EBLN2Q6P2I7 272 aa14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 FOXI2Q6ZQN5 318 aa14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 ZNF256Q9Y2P7 627 aaPredicted RBP14.23□□□□□ -0.13
CSPG4P13-201ENST00000565545 H7BYZ3 331 aa14.22□□□□□ -0.13
CSPG4P13-201ENST00000565545 HIST1H1AQ02539 215 aaPredicted RBP14.22□□□□□ -0.13
CSPG4P13-201ENST00000565545 IBA57Q5T440 356 aaKnown RBP14.22□□□□□ -0.13
CSPG4P13-201ENST00000565545 WFDC9Q8NEX5 89 aa14.22□□□□□ -0.13
CSPG4P13-201ENST00000565545 A0A0J9YX75 114 aa14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 IZUMO1RA6ND01 250 aa14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 PRB4P10163 310 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 SMUG1Q53HV7 270 aa14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 Q8TAT8 98 aa14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 DAZAP1Q96EP5 407 aaKnown RBP14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 ODF3Q96PU9 254 aa14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 SAV1Q9H4B6 383 aaPredicted RBP14.21□□□□□ -0.13
CSPG4P13-201ENST00000565545 CD33P20138 364 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 DEFB131AP59861 70 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 BTN1A1Q13410 526 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 OXLD1Q5BKU9 147 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 ZC2HC1AQ96GY0 325 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 C8orf49Q96NF6 230 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 IMMP2LQ96T52 175 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 FAM110AQ9BQ89 295 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 MAP6D1Q9H9H5 199 aa14.2□□□□□ -0.14
CSPG4P13-201ENST00000565545 NOTCH3Q9UM47 2321 aa14.19□□□□□ -0.14
CSPG4P13-201ENST00000565545 C19orf71A6NCJ1 209 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms