RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 hCG_2014768A0A024R1R8 64 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 IGKV2-40A0A087WW87 121 aaPredicted RBP7□□□□□ -1.29
CMTM3-209ENST00000565003 C7orf71A4D174 169 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 SNURFLB1AK76 121 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 IGKV2D-40P01614 121 aaPredicted RBP7□□□□□ -1.29
CMTM3-209ENST00000565003 SLC25A5P05141 298 aaKnown RBP7□□□□□ -1.29
CMTM3-209ENST00000565003 OR10J4P0C629 311 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 HOXA5P20719 270 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 FAM3BP58499 235 aaPredicted RBP7□□□□□ -1.29
CMTM3-209ENST00000565003 CYCSP99999 105 aaKnown RBP7□□□□□ -1.29
CMTM3-209ENST00000565003 CD300CQ08708 224 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 BTN1A1Q13410 526 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 ICAM4Q14773 271 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 FAM122CQ6P4D5 195 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 PYGO2Q9BRQ0 406 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 AAMDCQ9H7C9 122 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 PRELID1Q9Y255 219 aa7□□□□□ -1.29
CMTM3-209ENST00000565003 DNAH17Q9UFH2 4485 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 TRAV26-1A0A087WT03 109 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 SSNA1O43805 119 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 ZNF324O75467 553 aaPredicted RBP6.99□□□□□ -1.29
CMTM3-209ENST00000565003 MPC2O95563 127 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 NBEAP1P0C6P0 100 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 M6PRP20645 277 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 DAZ2Q13117 558 aaKnown RBP6.99□□□□□ -1.29
CMTM3-209ENST00000565003 OR5I1Q13606 314 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 PRR9Q5T870 116 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 C1orf134Q5TEV5 83 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 Q6ZQT7 251 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 C9orf47Q6ZRZ4 202 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 Q6ZTI0 123 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 C11orf72Q8NBR9 251 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 FXYD5Q96DB9 178 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 PHYHIPLQ96FC7 376 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 LINC00477Q96M19 166 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 ATP5SQ99766 215 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 VGLL1Q99990 258 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 PAXXQ9BUH6 204 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 MRPL32Q9BYC8 188 aaKnown RBP6.99□□□□□ -1.29
CMTM3-209ENST00000565003 OR51M1Q9H341 326 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 GSN-AS1Q9NRJ2 163 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 KCNIP2Q9NS61 270 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 FUT9Q9Y231 359 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 LINC00588Q9Y4M8 146 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 HSPB11Q9Y547 144 aa6.99□□□□□ -1.29
CMTM3-209ENST00000565003 A0A0J9YY99 117 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 NBDYA0A0U1RRE5 68 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 CRISP2P16562 243 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 RNASE4P34096 147 aaKnown RBP6.98□□□□□ -1.29
CMTM3-209ENST00000565003 CCL18P55774 89 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 SOHLH1Q5JUK2 328 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 SSX7Q7RTT5 188 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 TMPRSS5Q9H3S3 457 aa6.98□□□□□ -1.29
CMTM3-209ENST00000565003 C17orf112F2Z3M2 114 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 OR7C2O60412 319 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 GPX1P07203 203 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 PET100P0DJ07 73 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 DEFA1P59665 94 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 DEFA3P59666 94 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 ANXA2RQ3ZCQ2 193 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 FFAR4Q5NUL3 377 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 TMEM78Q5T7P6 136 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 EIF4E3Q8N5X7 224 aaKnown RBP6.97□□□□□ -1.29
CMTM3-209ENST00000565003 ZNF680Q8NEM1 530 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 Q8TAT8 98 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 RXFP4Q8TDU9 374 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 GNPNAT1Q96EK6 184 aaPredicted RBP6.97□□□□□ -1.29
CMTM3-209ENST00000565003 LINC00467Q9BRT7 94 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 SMIM3Q9BZL3 60 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 ZNF492Q9P255 531 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 MBD2Q9UBB5 411 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 KLF12Q9Y4X4 402 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 PKHD1P08F94 4074 aa6.97□□□□□ -1.29
CMTM3-209ENST00000565003 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 EIF3GO75821 320 aaKnown RBP eCLIP6.96□□□□□ -1.3
CMTM3-209ENST00000565003 NMBP08949 121 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 RPL12P30050 165 aaKnown RBP6.96□□□□□ -1.3
CMTM3-209ENST00000565003 RANP62826 216 aaKnown RBP6.96□□□□□ -1.3
CMTM3-209ENST00000565003 UBE2L3P68036 154 aaKnown RBP6.96□□□□□ -1.3
CMTM3-209ENST00000565003 ZNF575Q86XF7 245 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 C18orf15Q96N68 181 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 Q9H3A6 140 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 WFDC1Q9HC57 220 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 TP53TG3Q9ULZ0 132 aa6.96□□□□□ -1.3
CMTM3-209ENST00000565003 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 TRGV2A0A075B6R0 118 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 RGS13O14921 159 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 SPINK4O60575 86 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 IFNA5P01569 189 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 MED14OSP0DP75 135 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 ZNF138P52744 262 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 TCL1AP56279 114 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 TNP2Q05952 138 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 KHDC3LQ587J8 217 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 IBA57Q5T440 356 aaKnown RBP6.95□□□□□ -1.3
CMTM3-209ENST00000565003 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
CMTM3-209ENST00000565003 SCGB1C1Q8TD33 95 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms