RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DEFB131AP59861 70 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 DEFB1P60022 68 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 TMEM183BQ1AE95 376 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 FAM74A3Q4VXF1 159 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 TMEM75Q8N9X5 138 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 FMC1Q96HJ9 113 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 SGK494Q96LW2 274 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 GPR61Q9BZJ8 451 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 MAP6D1Q9H9H5 199 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 KLF12Q9Y4X4 402 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 HYDINQ4G0P3 5121 aa8.26□□□□□ -1.09
SF3B3-205ENST00000564899 HUWE1Q7Z6Z7 4374 aaKnown RBP8.25□□□□□ -1.09
SF3B3-205ENST00000564899 RBAKDNA6NC62 111 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 C9JCJ5 164 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 F6UB75 175 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 K7EIL1 84 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 GNG4P50150 75 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 TAS2R60P59551 318 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 FLI1Q01543 452 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-205ENST00000564899 HIST1H1AQ02539 215 aaPredicted RBP8.25□□□□□ -1.09
SF3B3-205ENST00000564899 ERCC8Q13216 396 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 CENPWQ5EE01 88 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 PRNTQ86SH4 94 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 Q86TA4 180 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 OR8A1Q8NGG7 326 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 OR10J6PQ8NGY7 276 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 LYSTQ99698 3801 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 VGLL1Q99990 258 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 PSG8Q9UQ74 426 aa8.25□□□□□ -1.09
SF3B3-205ENST00000564899 CARHSP1Q9Y2V2 147 aaKnown RBP8.25□□□□□ -1.09
SF3B3-205ENST00000564899 TRBV20OR9-2A0A075B6H5 130 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 TRBV6-1A0A0K0K1D8 114 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 FBLL1A6NHQ2 334 aaKnown RBP8.24□□□□□ -1.09
SF3B3-205ENST00000564899 IGLV2-11P01706 119 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF705DP0CH99 300 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF705BP0CI00 300 aaPredicted RBP8.24□□□□□ -1.09
SF3B3-205ENST00000564899 ODF3L2Q3SX64 289 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 C10orf91Q5T1B1 145 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 EBLN2Q6P2I7 272 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 FOXI2Q6ZQN5 318 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 Q8TAT8 98 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 IGF2BP2-AS1Q96M15 143 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 NAT8Q9UHE5 227 aa8.24□□□□□ -1.09
SF3B3-205ENST00000564899 PGPEP1LA6NFU8 196 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 KNCNA6PVL3 124 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 OR11H12B2RN74 326 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 NPIPB6E9PJ23 425 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 LTAP01374 205 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 APOC3P02656 99 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 S100A1P23297 94 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 CMC4P56277 68 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-205ENST00000564899 TMEM241Q24JQ0 296 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 C9orf47Q6ZRZ4 202 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 BAGE2Q86Y30 109 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 NHLRC2Q8NBF2 726 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 ASCL2Q99929 193 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
SF3B3-205ENST00000564899 SAV1Q9H4B6 383 aaPredicted RBP8.23□□□□□ -1.09
SF3B3-205ENST00000564899 A0A0J9YX75 114 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 DUSP14O95147 198 aaKnown RBP8.22□□□□□ -1.09
SF3B3-205ENST00000564899 CD7P09564 240 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF138P52744 262 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF124Q15973 351 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 APRG1Q8IVJ8 170 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 TVP23CQ96ET8 276 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 LINC00477Q96M19 166 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 NDFIP1Q9BT67 221 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 ZNF492Q9P255 531 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 ZFP30Q9Y2G7 519 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 LY96Q9Y6Y9 160 aa8.22□□□□□ -1.09
SF3B3-205ENST00000564899 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.09
SF3B3-205ENST00000564899 M0R036 132 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 CT45A10P0DMU9 189 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 MGST1P10620 155 aaKnown RBP8.21□□□□□ -1.1
SF3B3-205ENST00000564899 HLA-DRB4P13762 266 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 RPL23P62829 140 aaKnown RBP8.21□□□□□ -1.1
SF3B3-205ENST00000564899 PNRC1Q12796 327 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-205ENST00000564899 ADIRFQ15847 76 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 SAPCD1Q5SSQ6 148 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 LINC01551Q86U37 167 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 GTSCR1Q86UQ5 136 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 TMEM183AQ8IXX5 376 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 SVBPQ8N300 66 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 OR4B1Q8NGF8 309 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 OCC1Q8TAD7 63 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 SMIM12Q96EX1 92 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 PRR25Q96S07 402 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 FAM110AQ9BQ89 295 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 SDF2L1Q9HCN8 221 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 HLA-DRB4X5D2U9 266 aa8.21□□□□□ -1.1
SF3B3-205ENST00000564899 CSMD3Q7Z407 3707 aa8.2□□□□□ -1.1
SF3B3-205ENST00000564899 IGKV3-20P01619 116 aa8.2□□□□□ -1.1
SF3B3-205ENST00000564899 IGLV2-8P01709 118 aa8.2□□□□□ -1.1
SF3B3-205ENST00000564899 KRTAP10-11P60412 298 aa8.2□□□□□ -1.1
SF3B3-205ENST00000564899 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms