RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZNF503Q96F45 646 aa14.13□□□□□ -0.15
CMTM3-207ENST00000564060 PYGO2Q9BRQ0 406 aa14.13□□□□□ -0.15
CMTM3-207ENST00000564060 AGPAT4-IT1Q9H0P7 198 aa14.13□□□□□ -0.15
CMTM3-207ENST00000564060 TIMM8BQ9Y5J9 83 aaPredicted RBP14.13□□□□□ -0.15
CMTM3-207ENST00000564060 HYDINQ4G0P3 5121 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 TRAV12-3A0A0B4J271 114 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 PRM2P04554 102 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 RAB2AP61019 212 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 SERF2P84101 59 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 ERCC8Q13216 396 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 KIR3DS1Q14943 382 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 RNASE8Q8TDE3 154 aaKnown RBP14.12□□□□□ -0.15
CMTM3-207ENST00000564060 RXFP4Q8TDU9 374 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 Q9H3A6 140 aa14.12□□□□□ -0.15
CMTM3-207ENST00000564060 IGKV2-40A0A087WW87 121 aaPredicted RBP14.11□□□□□ -0.15
CMTM3-207ENST00000564060 PLAC8L1A1L4L8 177 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 C7orf71A4D174 169 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 RBAKDNA6NC62 111 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 KLLNB2CW77 178 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 IGKV2D-40P01614 121 aaPredicted RBP14.11□□□□□ -0.15
CMTM3-207ENST00000564060 HTN3P15516 51 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 CRISP2P16562 243 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 Q5BKY6 102 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 FAM19A4Q96LR4 140 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 TNFSF18Q9UNG2 199 aa14.11□□□□□ -0.15
CMTM3-207ENST00000564060 BORCS7-ASMTA0A0B4J1R7 106 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 TRBV7-9A0A0J9YWB2 115 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 GPX1P07203 203 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 P0DMU3 169 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 FAM231AP0DMU4 169 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 FAM231CP0DMU5 169 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 ATP6V0CP27449 155 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 CDC34P49427 236 aaPredicted RBP14.1□□□□□ -0.15
CMTM3-207ENST00000564060 GNPNAT1Q96EK6 184 aaPredicted RBP14.1□□□□□ -0.15
CMTM3-207ENST00000564060 PLA2G2EQ9NZK7 142 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 ZNF492Q9P255 531 aa14.1□□□□□ -0.15
CMTM3-207ENST00000564060 RNF222A6NCQ9 220 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 SNURFLB1AK76 121 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 DEFB130BP0DP73 79 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 DEFB130AP0DP74 79 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 ZNF138P52744 262 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 CMTM2Q8TAZ6 248 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 OTORQ9NRC9 128 aa14.09□□□□□ -0.15
CMTM3-207ENST00000564060 ARL6IP6Q8N6S5 226 aa14.08□□□□□ -0.16
CMTM3-207ENST00000564060 ZNF680Q8NEM1 530 aa14.08□□□□□ -0.16
CMTM3-207ENST00000564060 VGLL1Q99990 258 aa14.08□□□□□ -0.16
CMTM3-207ENST00000564060 CBY3A6NI87 242 aa14.07□□□□□ -0.16
CMTM3-207ENST00000564060 ATP5G1P05496 136 aa14.07□□□□□ -0.16
CMTM3-207ENST00000564060 ATP5G3P48201 142 aa14.07□□□□□ -0.16
CMTM3-207ENST00000564060 LINC00467Q9BRT7 94 aa14.07□□□□□ -0.16
CMTM3-207ENST00000564060 NOP10Q9NPE3 64 aaKnown RBP14.07□□□□□ -0.16
CMTM3-207ENST00000564060 LENEPQ9Y5L5 61 aa14.07□□□□□ -0.16
CMTM3-207ENST00000564060 DIRC3C9JPN6 131 aa14.06□□□□□ -0.16
CMTM3-207ENST00000564060 TAAR5O14804 337 aa14.06□□□□□ -0.16
CMTM3-207ENST00000564060 STAG3L2P0CL84 134 aa14.06□□□□□ -0.16
CMTM3-207ENST00000564060 STAG3L3P0CL85 134 aa14.06□□□□□ -0.16
CMTM3-207ENST00000564060 RNASE4P34096 147 aaKnown RBP14.06□□□□□ -0.16
CMTM3-207ENST00000564060 BTN1A1Q13410 526 aa14.06□□□□□ -0.16
CMTM3-207ENST00000564060 EIF4E3Q8N5X7 224 aaKnown RBP14.06□□□□□ -0.16
CMTM3-207ENST00000564060 C15orf53Q8NAA6 179 aa14.06□□□□□ -0.16
CMTM3-207ENST00000564060 PGPA6NDG6 321 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 HMGB3O15347 200 aaKnown RBP14.05□□□□□ -0.16
CMTM3-207ENST00000564060 ARL14EPLP0DKL9 152 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 CD300CQ08708 224 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 RPL7L1Q6DKI1 246 aaKnown RBP14.05□□□□□ -0.16
CMTM3-207ENST00000564060 ZFAND2AQ8N6M9 145 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 TMED6Q8WW62 240 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 RAB24Q969Q5 203 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 HYLS1Q96M11 299 aa14.05□□□□□ -0.16
CMTM3-207ENST00000564060 ACTR3CQ9C0K3 210 aaPredicted RBP14.05□□□□□ -0.16
CMTM3-207ENST00000564060 ARPC5O15511 151 aa14.04□□□□□ -0.16
CMTM3-207ENST00000564060 ZNF324O75467 553 aaPredicted RBP14.04□□□□□ -0.16
CMTM3-207ENST00000564060 EIF3GO75821 320 aaKnown RBP eCLIP14.04□□□□□ -0.16
CMTM3-207ENST00000564060 ANXA2RQ3ZCQ2 193 aa14.04□□□□□ -0.16
CMTM3-207ENST00000564060 TMEM88Q6PEY1 159 aa14.04□□□□□ -0.16
CMTM3-207ENST00000564060 Q8TAT8 98 aa14.04□□□□□ -0.16
CMTM3-207ENST00000564060 SH3BGRL3Q9H299 93 aa14.04□□□□□ -0.16
CMTM3-207ENST00000564060 F5H768 121 aa14.03□□□□□ -0.16
CMTM3-207ENST00000564060 G3V3Q6 166 aa14.03□□□□□ -0.16
CMTM3-207ENST00000564060 RGS13O14921 159 aa14.03□□□□□ -0.16
CMTM3-207ENST00000564060 DAZ2Q13117 558 aaKnown RBP14.03□□□□□ -0.16
CMTM3-207ENST00000564060 TMEM167BQ9NRX6 74 aa14.03□□□□□ -0.16
CMTM3-207ENST00000564060 SERTM2A0A1B0GWG4 89 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 CXorf1O96002 111 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 UBE2DNLQ8IWF7 75 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 LINC00612Q8N6U2 182 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 POM121L12Q8N7R1 296 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 ST6GAL2Q96JF0 529 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 RPH3ALQ9UNE2 315 aa14.02□□□□□ -0.17
CMTM3-207ENST00000564060 IGHV1OR15-1A0A075B7D0 117 aa14.01□□□□□ -0.17
CMTM3-207ENST00000564060 GCHFRP30047 84 aa14.01□□□□□ -0.17
CMTM3-207ENST00000564060 IBA57Q5T440 356 aaKnown RBP14.01□□□□□ -0.17
CMTM3-207ENST00000564060 ARPC5LQ9BPX5 153 aa14.01□□□□□ -0.17
CMTM3-207ENST00000564060 KMT2AQ03164 3969 aa14□□□□□ -0.17
CMTM3-207ENST00000564060 ZNF345Q14585 488 aa14□□□□□ -0.17
CMTM3-207ENST00000564060 AKR1C8PQ5T2L2 129 aa14□□□□□ -0.17
CMTM3-207ENST00000564060 PRR9Q5T870 116 aa14□□□□□ -0.17
CMTM3-207ENST00000564060 C5orf17Q8NAS9 161 aa14□□□□□ -0.17
CMTM3-207ENST00000564060 SUN5Q8TC36 379 aa14□□□□□ -0.17
CMTM3-207ENST00000564060 CTXND1A0A1B0GTU2 59 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms