RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 VSIG2Q96IQ7 327 aa14.46□□□□□ -0.09
CHD9-208ENST00000563410 GSN-AS1Q9NRJ2 163 aa14.46□□□□□ -0.09
CHD9-208ENST00000563410 A0A1W2PPQ1 181 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 PYYP10082 97 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 HIST1H1EP10412 219 aaKnown RBP14.45□□□□□ -0.1
CHD9-208ENST00000563410 CD300CQ08708 224 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 BTN1A1Q13410 526 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 MAPKAPK5-AS1Q8N8E1 139 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 C18orf15Q96N68 181 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 LINC00467Q9BRT7 94 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 AGPAT4-IT1Q9H0P7 198 aa14.45□□□□□ -0.1
CHD9-208ENST00000563410 A0A096LPF7 62 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 FGF7P21781 194 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 PDE6HQ13956 83 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 GCSAMLQ5JQS6 135 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 ZNF680Q8NEM1 530 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 LINC00477Q96M19 166 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 PRELID1Q9Y255 219 aa14.44□□□□□ -0.1
CHD9-208ENST00000563410 H2AFB2P0C5Z0 115 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 HBG1P69891 147 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 HBG2P69892 147 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 ATP6V1FQ16864 119 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 ANXA2RQ3ZCQ2 193 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 STX12Q86Y82 276 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 EXOC3-AS1Q8N2X6 119 aa14.43□□□□□ -0.1
CHD9-208ENST00000563410 TRGV2A0A075B6R0 118 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 CRISP2P16562 243 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 BTF3P20290 206 aaKnown RBP14.42□□□□□ -0.1
CHD9-208ENST00000563410 KRTAP10-2P60368 255 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 C9orf47Q6ZRZ4 202 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 EIF4E3Q8N5X7 224 aaKnown RBP14.42□□□□□ -0.1
CHD9-208ENST00000563410 BLNKQ8WV28 456 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 SLC25A2Q9BXI2 301 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 NPCDR1Q9BY65 106 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 KLF12Q9Y4X4 402 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 TIMM9Q9Y5J7 89 aa14.42□□□□□ -0.1
CHD9-208ENST00000563410 TRGV1A0A0A0MS02 117 aa14.41□□□□□ -0.1
CHD9-208ENST00000563410 SPINK4O60575 86 aa14.41□□□□□ -0.1
CHD9-208ENST00000563410 RNASE4P34096 147 aaKnown RBP14.41□□□□□ -0.1
CHD9-208ENST00000563410 PRR9Q5T870 116 aa14.41□□□□□ -0.1
CHD9-208ENST00000563410 FAM167A-AS1Q96KT0 104 aa14.41□□□□□ -0.1
CHD9-208ENST00000563410 GPN1Q9HCN4 374 aaPredicted RBP14.41□□□□□ -0.1
CHD9-208ENST00000563410 FUT9Q9Y231 359 aa14.41□□□□□ -0.1
CHD9-208ENST00000563410 MPDU1O75352 247 aa14.4□□□□□ -0.1
CHD9-208ENST00000563410 TCL1AP56279 114 aa14.4□□□□□ -0.1
CHD9-208ENST00000563410 Q6ZQT7 251 aa14.4□□□□□ -0.1
CHD9-208ENST00000563410 ZFAND2AQ8N6M9 145 aa14.4□□□□□ -0.1
CHD9-208ENST00000563410 TP53TG3Q9ULZ0 132 aa14.4□□□□□ -0.1
CHD9-208ENST00000563410 IGKV2-40A0A087WW87 121 aaPredicted RBP14.39□□□□□ -0.11
CHD9-208ENST00000563410 IGKV2D-40P01614 121 aaPredicted RBP14.39□□□□□ -0.11
CHD9-208ENST00000563410 GPX1P07203 203 aa14.39□□□□□ -0.11
CHD9-208ENST00000563410 NHLH2Q02577 135 aa14.39□□□□□ -0.11
CHD9-208ENST00000563410 ICAM4Q14773 271 aa14.39□□□□□ -0.11
CHD9-208ENST00000563410 VGLL1Q99990 258 aa14.39□□□□□ -0.11
CHD9-208ENST00000563410 CCDC32Q9BV29 185 aa14.39□□□□□ -0.11
CHD9-208ENST00000563410 AAMDCQ9H7C9 122 aa14.39□□□□□ -0.11
CHD9-208ENST00000563410 NMBP08949 121 aa14.38□□□□□ -0.11
CHD9-208ENST00000563410 IBA57Q5T440 356 aaKnown RBP14.38□□□□□ -0.11
CHD9-208ENST00000563410 FAM122CQ6P4D5 195 aa14.38□□□□□ -0.11
CHD9-208ENST00000563410 MIR17HGQ75NE6 70 aa14.38□□□□□ -0.11
CHD9-208ENST00000563410 Q8N1X5 172 aa14.38□□□□□ -0.11
CHD9-208ENST00000563410 THAP6Q8TBB0 222 aa14.38□□□□□ -0.11
CHD9-208ENST00000563410 FAM240BA0A1B0GVZ2 78 aa14.37□□□□□ -0.11
CHD9-208ENST00000563410 LINC00315P59091 139 aa14.37□□□□□ -0.11
CHD9-208ENST00000563410 Q6ZRN7 208 aaPredicted RBP14.37□□□□□ -0.11
CHD9-208ENST00000563410 NBEAP1P0C6P0 100 aa14.36□□□□□ -0.11
CHD9-208ENST00000563410 TMEM78Q5T7P6 136 aa14.36□□□□□ -0.11
CHD9-208ENST00000563410 OR5C1Q8NGR4 320 aa14.36□□□□□ -0.11
CHD9-208ENST00000563410 ST6GAL2Q96JF0 529 aa14.36□□□□□ -0.11
CHD9-208ENST00000563410 ZNF492Q9P255 531 aa14.36□□□□□ -0.11
CHD9-208ENST00000563410 IGHV1OR15-1A0A075B7D0 117 aa14.35□□□□□ -0.11
CHD9-208ENST00000563410 RGS13O14921 159 aa14.35□□□□□ -0.11
CHD9-208ENST00000563410 SIVA1O15304 175 aa14.35□□□□□ -0.11
CHD9-208ENST00000563410 OR51M1Q9H341 326 aa14.35□□□□□ -0.11
CHD9-208ENST00000563410 MRPL16Q9NX20 251 aaKnown RBP14.35□□□□□ -0.11
CHD9-208ENST00000563410 NDUFA13Q9P0J0 144 aa14.35□□□□□ -0.11
CHD9-208ENST00000563410 PAX4O43316 350 aa14.34□□□□□ -0.11
CHD9-208ENST00000563410 SIX6O95475 246 aa14.34□□□□□ -0.11
CHD9-208ENST00000563410 IGHV3-53P01767 116 aa14.34□□□□□ -0.11
CHD9-208ENST00000563410 FXYD5Q96DB9 178 aa14.34□□□□□ -0.11
CHD9-208ENST00000563410 ICOSQ9Y6W8 199 aa14.34□□□□□ -0.11
CHD9-208ENST00000563410 OR10J4P0C629 311 aa14.33□□□□□ -0.12
CHD9-208ENST00000563410 PHYHIPLQ96FC7 376 aa14.33□□□□□ -0.12
CHD9-208ENST00000563410 SCRT2Q9NQ03 307 aa14.33□□□□□ -0.12
CHD9-208ENST00000563410 OR5AC2Q9NZP5 309 aa14.33□□□□□ -0.12
CHD9-208ENST00000563410 H0YIZ8 118 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 NXPH4O95158 308 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 ZNF138P52744 262 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 CRYBA4P53673 196 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 ASAH1Q13510 395 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 FHL2Q14192 279 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 Q8TAT8 98 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 PAXXQ9BUH6 204 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 MRPL32Q9BYC8 188 aaKnown RBP14.32□□□□□ -0.12
CHD9-208ENST00000563410 WDR61Q9GZS3 305 aaKnown RBP14.32□□□□□ -0.12
CHD9-208ENST00000563410 SLC25A31Q9H0C2 315 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 PRO0255Q9UI72 69 aa14.32□□□□□ -0.12
CHD9-208ENST00000563410 TRBV7-9A0A0J9YWB2 115 aa14.31□□□□□ -0.12
CHD9-208ENST00000563410 E5RGE8 158 aa14.31□□□□□ -0.12
CHD9-208ENST00000563410 MZT2BQ6NZ67 158 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms