RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 AGPAT2O15120 278 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 GAGE7O76087 117 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 C1QBP02746 253 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 GAGE12FP0CL80 117 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 GAGE12GP0CL81 117 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 GAGE12IP0CL82 117 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 M6PRP20645 277 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 KRTAP10-2P60368 255 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 RAB31Q13636 194 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 PXDC1Q5TGL8 231 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 S100A7AQ86SG5 101 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 Q8N1X5 172 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 OR10J6PQ8NGY7 276 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 MGST2Q99735 147 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 Q9H3A6 140 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
HDGFL3-203ENST00000563404 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 H3BQ15 152 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 TAAR5O14804 337 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 ZNF345Q14585 488 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 OPCMLQ14982 345 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 BPIFA4PQ86YQ2 179 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 SAT2Q96F10 170 aaPredicted RBP11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 HYLS1Q96M11 299 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 ATP5SQ99766 215 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
HDGFL3-203ENST00000563404 A0A0D9SG52 128 aa11.6□□□□□ -0.55
HDGFL3-203ENST00000563404 J3KRW8 73 aa11.6□□□□□ -0.55
HDGFL3-203ENST00000563404 CT45A10P0DMU9 189 aa11.6□□□□□ -0.55
HDGFL3-203ENST00000563404 OR11H4Q8NGC9 324 aa11.6□□□□□ -0.55
HDGFL3-203ENST00000563404 HERC1Q15751 4861 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 TRAV5A0A0B4J249 113 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 SMLR1H3BR10 107 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 COX7A2P2O60397 106 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 ZNF266Q14584 549 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 CCDC28AQ8IWP9 274 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
HDGFL3-203ENST00000563404 TRAV12-3A0A0B4J271 114 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 ARPC5O15511 151 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 IFNA5P01569 189 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 TTC32Q5I0X7 151 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 C10orf113Q5VZT2 155 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 Q6ZTI0 123 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 SCRT2Q9NQ03 307 aa11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
HDGFL3-203ENST00000563404 SNURFLB1AK76 121 aa11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 NPIPB6E9PJ23 425 aa11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 H3BNG1 76 aa11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 RPL29P47914 159 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 VSIG2Q96IQ7 327 aa11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 WDR61Q9GZS3 305 aaKnown RBP11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 PXMP4Q9Y6I8 212 aa11.57□□□□□ -0.56
HDGFL3-203ENST00000563404 FAT1Q14517 4588 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 CAMLGP49069 296 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 DAZ2Q13117 558 aaKnown RBP11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 ZFP69Q49AA0 526 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 MIC13Q5XKP0 118 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 SCGB1C1Q8TD33 95 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 ODF3Q96PU9 254 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 WFDC1Q9HC57 220 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 DNAJC4Q9NNZ3 241 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 KCNIP2Q9NS61 270 aa11.56□□□□□ -0.56
HDGFL3-203ENST00000563404 A0A096LPF7 62 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 BORCS7-ASMTA0A0B4J1R7 106 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 UBE2L5PA0A1B0GUS4 154 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 PFDN1O60925 122 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 LEPP41159 167 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 C11orf72Q8NBR9 251 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 VPS13BQ7Z7G8 4022 aa11.55□□□□□ -0.56
HDGFL3-203ENST00000563404 C17orf112F2Z3M2 114 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 FGF7P21781 194 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 ERCC8Q13216 396 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 Q6ZRN7 208 aaPredicted RBP11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 NPCDR1Q9BY65 106 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 SMIM3Q9BZL3 60 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
HDGFL3-203ENST00000563404 M0R3E3 92 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 LINC00315P59091 139 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 CD300CQ08708 224 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 GUK1Q16774 197 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 LGALSLQ3ZCW2 172 aaPredicted RBP11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 Q6ZRG5 221 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 TMUB2Q71RG4 321 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 FAM19A4Q96LR4 140 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 CYTL1Q9NRR1 136 aa11.53□□□□□ -0.56
HDGFL3-203ENST00000563404 ZNF324O75467 553 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-203ENST00000563404 NDUFB4O95168 129 aa11.52□□□□□ -0.57
HDGFL3-203ENST00000563404 EIF5AP63241 154 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-203ENST00000563404 C18orf15Q96N68 181 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms