RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GFI1BQ5VTD9 330 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 TCTE3Q8IZS6 198 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 LINC00477Q96M19 166 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 ARPC5LQ9BPX5 153 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 AAMDCQ9H7C9 122 aa6.12□□□□□ -1.43
UBR1-204ENST00000563239 VPS13DQ5THJ4 4388 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 A0A0D9SG52 128 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 A0A1B0GVG6 124 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 PLAC8L1A1L4L8 177 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 CXorf65A6NEN9 183 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 ZNF705GA8MUZ8 300 aaPredicted RBP6.11□□□□□ -1.43
UBR1-204ENST00000563239 DIRC3C9JPN6 131 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 BCL2L11O43521 198 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 AZU1P20160 251 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 GCHFRP30047 84 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 CD300CQ08708 224 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 C12orf74Q32Q52 190 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 LGALSLQ3ZCW2 172 aaPredicted RBP6.11□□□□□ -1.43
UBR1-204ENST00000563239 CEMP1Q6PRD7 247 aaPredicted RBP6.11□□□□□ -1.43
UBR1-204ENST00000563239 TMUB2Q71RG4 321 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 PHLDA1Q8WV24 401 aaPredicted RBP6.11□□□□□ -1.43
UBR1-204ENST00000563239 ACTR3CQ9C0K3 210 aaPredicted RBP6.11□□□□□ -1.43
UBR1-204ENST00000563239 OTORQ9NRC9 128 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 PPP1R14DQ9NXH3 145 aa6.11□□□□□ -1.43
UBR1-204ENST00000563239 hCG_2014768A0A024R1R8 64 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 LOC102723971A0A1B0GUV8 181 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 PGPA6NDG6 321 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 KLLNB2CW77 178 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 ZNF324O75467 553 aaPredicted RBP6.1□□□□□ -1.43
UBR1-204ENST00000563239 HBE1P02100 147 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 CRISP2P16562 243 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 TSPOP30536 169 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 LEPP41159 167 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 RRN3P1Q2M238 152 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 PRR9Q5T870 116 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 Q6ZQT7 251 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 Q6ZTC4 211 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 ZNF767PQ75MW2 155 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 ZFAND2AQ8N6M9 145 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 LINC01587Q99440 93 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 TMPRSS5Q9H3S3 457 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 ZNF492Q9P255 531 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 DKK2Q9UBU2 259 aa6.1□□□□□ -1.43
UBR1-204ENST00000563239 TRAV12-3A0A0B4J271 114 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 CTXND1A0A1B0GTU2 59 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 TMEM189A5PLL7 270 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 RBAKDNA6NC62 111 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 NUPR2A6NF83 97 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 GGTLC3B5MD39 225 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 J3KRW8 73 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 CXorf1O96002 111 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 C1QBP02746 253 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 SLC25A5P05141 298 aaKnown RBP6.09□□□□□ -1.43
UBR1-204ENST00000563239 SEC11BP0C7V7 166 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 FHITP49789 147 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 ZNF138P52744 262 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 EMP1P54849 157 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 TAS2R60P59551 318 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 GNG5P63218 68 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 BTN1A1Q13410 526 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 FAM222AQ5U5X8 452 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 TMEM256Q8N2U0 113 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 ARL6IP6Q8N6S5 226 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 Q8TAT8 98 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 HYLS1Q96M11 299 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 C20orf144Q9BQM9 153 aa6.09□□□□□ -1.43
UBR1-204ENST00000563239 YTHDF2Q9Y5A9 579 aaKnown RBP6.09□□□□□ -1.43
UBR1-204ENST00000563239 TRBV7-9A0A0J9YWB2 115 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 LCE6AA0A183 80 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 KANTRA0A1W2PQU2 76 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 C7orf71A4D174 169 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 H7BYZ3 331 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 NMBP08949 121 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 CSN1S1P47710 185 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 FGF8P55075 233 aaPredicted RBP6.08□□□□□ -1.44
UBR1-204ENST00000563239 AKR1C8PQ5T2L2 129 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 TMEM78Q5T7P6 136 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 AKAP14Q86UN6 197 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 STOML3Q8TAV4 291 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 RNASE8Q8TDE3 154 aaKnown RBP6.08□□□□□ -1.44
UBR1-204ENST00000563239 RXFP4Q8TDU9 374 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 TVP23CQ96ET8 276 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 ZNF471Q9BX82 626 aaPredicted RBP6.08□□□□□ -1.44
UBR1-204ENST00000563239 TMEM167BQ9NRX6 74 aa6.08□□□□□ -1.44
UBR1-204ENST00000563239 TRAV8-1A0A0A6YYK1 113 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 MAP1LC3B2A6NCE7 125 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 IGLV2-11P01706 119 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 RNASE4P34096 147 aaKnown RBP6.07□□□□□ -1.44
UBR1-204ENST00000563239 GOLT1AQ6ZVE7 132 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 TMED6Q8WW62 240 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 MBD3L1Q8WWY6 194 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 LINC00467Q9BRT7 94 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 MAP1LC3BQ9GZQ8 125 aa6.07□□□□□ -1.44
UBR1-204ENST00000563239 TRAV10A0A0B4J240 114 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 A0A1W2PRE2 83 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 FAM74A7A6NL05 159 aa6.06□□□□□ -1.44
UBR1-204ENST00000563239 C11orf94C9JXX5 98 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms