RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 A0A1B0GW15 77 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 RBP4P02753 201 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 CLEC3BP05452 202 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 PRSS1P07477 247 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 NHLRC4P0CG21 123 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 PRB4P10163 310 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 ATP5IP56385 69 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 KLF17Q5JT82 389 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 MAPKAPK5-AS1Q8N8E1 139 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 PPP1R35Q8TAP8 253 aa11.07□□□□□ -0.64
GTF3C1-203ENST00000562609 IGKV1D-37A0A075B6S9 117 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 TMEM213A2RRL7 107 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 ZNF785A8K8V0 405 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 IGKCP01834 107 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 IGKV1-16P04430 117 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 C17orf58Q2M2W7 97 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 GOLT1AQ6ZVE7 132 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 CCL17Q92583 94 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 SMKR1H3BMG3 65 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 ITPR1Q14643 2758 aa11.06□□□□□ -0.64
GTF3C1-203ENST00000562609 VSTM5A8MXK1 200 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 POU2AF1Q16633 256 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 RITA1Q96K30 269 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 GAFA1Q96PS6 74 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 ZMAT4Q9H898 229 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 HIF1ANQ9NWT6 349 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 MRPL36Q9P0J6 103 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 U3KQK5 164 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 GRNP28799 593 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 GATA4P43694 442 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 FAM104BQ5XKR9 115 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 HRNRQ86YZ3 2850 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 MED13LQ71F56 2210 aa11.05□□□□□ -0.64
GTF3C1-203ENST00000562609 NPYP01303 97 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 MRPL51Q4U2R6 128 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 ZNF493Q6ZR52 646 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 C17orf100A8MU93 164 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 SHISA9B4DS77 424 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 IGLV2-11P01706 119 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 EVI2AP22794 236 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 ERHP84090 104 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 TAL2Q16559 108 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 C3orf36Q3SXR2 165 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 LINC01560Q8TB33 94 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 MORN3Q6PF18 240 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 PPDPFLQ8WWR9 84 aa11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 DLX4Q92988 240 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-203ENST00000562609 CCDC179H3BU77 68 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 CKS2P33552 79 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 OR10X1Q8NGY0 326 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 C8orf46Q8TAG6 207 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 FOXC2Q99958 501 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 PLXNB1O43157 2135 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 TMSB15BA0A087X1C1 80 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 TMEM8BA6NDV4 472 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GAGE12JA6NER3 117 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GAGE7O76087 117 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 CGB3P0DN86 165 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 CGB7P0DN87 165 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GP9P14770 177 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 PSMB2P49721 201 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 GAGE4Q13068 117 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 DIAPH2-AS1Q14236 149 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 TMEM160Q9NX00 188 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 TNFRSF18Q9Y5U5 241 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 PIEZO1Q92508 2521 aa11.03□□□□□ -0.64
GTF3C1-203ENST00000562609 TRBV20-1A0A075B6N2 111 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 E7EUB6 86 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 FCN3O75636 299 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 DPM2O94777 84 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 CCL3L1P16619 93 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 LYZL1Q6UWQ5 148 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 KIR2DL4Q99706 377 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 MALRD1Q5VYJ5 2156 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 HIVEP3Q5T1R4 2406 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 LEPP41159 167 aa11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-203ENST00000562609 NAV3Q8IVL0 2385 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 CDSNQ15517 529 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 HARBI1Q96MB7 349 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 TRAV40A0A0B4J280 105 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 E7EQL1 145 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 IL4P05112 153 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 PRB3Q04118 309 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
GTF3C1-203ENST00000562609 LOC107984156A0A0G2JMH3 177 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms