RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 NRARPQ7Z6K4 114 aa13.18□□□□□ -0.3
CDH11-203ENST00000562325 CHAC2Q8WUX2 184 aa13.18□□□□□ -0.3
CDH11-203ENST00000562325 MITD1Q8WV92 249 aa13.18□□□□□ -0.3
CDH11-203ENST00000562325 LY96Q9Y6Y9 160 aa13.18□□□□□ -0.3
CDH11-203ENST00000562325 MBPP02686 304 aaPredicted RBP13.17□□□□□ -0.3
CDH11-203ENST00000562325 RPL29P47914 159 aaKnown RBP13.17□□□□□ -0.3
CDH11-203ENST00000562325 CRYBA4P53673 196 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 LYPD5Q6UWN5 251 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 C9orf47Q6ZRZ4 202 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 NEGR1Q7Z3B1 354 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 GSKIPQ9P0R6 139 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 WDR83OSQ9Y284 106 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 KLF12Q9Y4X4 402 aa13.17□□□□□ -0.3
CDH11-203ENST00000562325 TRBV7-9A0A0J9YWB2 115 aa13.16□□□□□ -0.3
CDH11-203ENST00000562325 HIST1H1EP10412 219 aaKnown RBP13.16□□□□□ -0.3
CDH11-203ENST00000562325 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
CDH11-203ENST00000562325 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
CDH11-203ENST00000562325 SPANXN2Q5MJ10 180 aa13.16□□□□□ -0.3
CDH11-203ENST00000562325 C20orf85Q9H1P6 137 aa13.16□□□□□ -0.3
CDH11-203ENST00000562325 UQCC1Q9NVA1 299 aa13.16□□□□□ -0.3
CDH11-203ENST00000562325 L7N2F9 121 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 M0R3E3 92 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 GPX1P07203 203 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 INPP1P49441 399 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 VAMP2P63027 116 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 CD300CQ08708 224 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 BTN1A1Q13410 526 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 SRRQ9GZT4 340 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 AGPAT4-IT1Q9H0P7 198 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 MSRB1Q9NZV6 116 aa13.15□□□□□ -0.3
CDH11-203ENST00000562325 FLG2Q5D862 2391 aaPredicted RBP13.14□□□□□ -0.31
CDH11-203ENST00000562325 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 RGS13O14921 159 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 EVI2AP22794 236 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 RNASE4P34096 147 aaKnown RBP13.14□□□□□ -0.31
CDH11-203ENST00000562325 MIC13Q5XKP0 118 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 C10orf126Q8N4M7 172 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
CDH11-203ENST00000562325 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 SLC39A9Q9NUM3 307 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 FLVCR2Q9UPI3 526 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 VPS13BQ7Z7G8 4022 aa13.14□□□□□ -0.31
CDH11-203ENST00000562325 IGHV1OR15-1A0A075B7D0 117 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 CENPXA8MT69 81 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 FAM229AH3BQW9 127 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 NDUFB4O95168 129 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 DNAH10OSP0CZ25 163 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 GCSHP23434 173 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 ERCC8Q13216 396 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 FHL2Q14192 279 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 TMEM78Q5T7P6 136 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 TRIQKQ629K1 86 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 ZFAND2AQ8N6M9 145 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 ARPC5LQ9BPX5 153 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 TMEM70Q9BUB7 260 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 TNFRSF18Q9Y5U5 241 aa13.13□□□□□ -0.31
CDH11-203ENST00000562325 SRRM2Q9UQ35 2752 aaKnown RBP13.12□□□□□ -0.31
CDH11-203ENST00000562325 ORM1P02763 201 aa13.12□□□□□ -0.31
CDH11-203ENST00000562325 S100A11P31949 105 aa13.12□□□□□ -0.31
CDH11-203ENST00000562325 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
CDH11-203ENST00000562325 ZNF846Q147U1 533 aa13.12□□□□□ -0.31
CDH11-203ENST00000562325 NTN5Q8WTR8 489 aaPredicted RBP13.12□□□□□ -0.31
CDH11-203ENST00000562325 SRIP30626 198 aa13.11□□□□□ -0.31
CDH11-203ENST00000562325 CAV2P51636 162 aa13.11□□□□□ -0.31
CDH11-203ENST00000562325 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
CDH11-203ENST00000562325 PRAF2O60831 178 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 IGHV3-53P01767 116 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
CDH11-203ENST00000562325 FUSP35637 526 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDH11-203ENST00000562325 BCAP31P51572 246 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 HBG1P69891 147 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 HBG2P69892 147 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 C8orf49Q96NF6 230 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 MRPL16Q9NX20 251 aaKnown RBP13.1□□□□□ -0.31
CDH11-203ENST00000562325 ZNF492Q9P255 531 aa13.1□□□□□ -0.31
CDH11-203ENST00000562325 K7EQD1 137 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 CST7O76096 145 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 BTCP35070 178 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 SULT1A1P50225 295 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 BAK1Q16611 211 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 Q6ZSN1 163 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 SH2D6Q7Z4S9 175 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 PCNPQ8WW12 178 aaKnown RBP13.09□□□□□ -0.31
CDH11-203ENST00000562325 RASL10AQ92737 203 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 TP53TG3Q9ULZ0 132 aa13.09□□□□□ -0.31
CDH11-203ENST00000562325 TRGV4A0A0C4DH28 118 aa13.08□□□□□ -0.32
CDH11-203ENST00000562325 TIRAPP58753 221 aa13.08□□□□□ -0.32
CDH11-203ENST00000562325 BAXQ07812 192 aa13.08□□□□□ -0.32
CDH11-203ENST00000562325 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
CDH11-203ENST00000562325 STX12Q86Y82 276 aa13.08□□□□□ -0.32
CDH11-203ENST00000562325 SPXQ9BT56 116 aa13.08□□□□□ -0.32
CDH11-203ENST00000562325 LYRM2Q9NU23 88 aaPredicted RBP13.08□□□□□ -0.32
CDH11-203ENST00000562325 ZNF138P52744 262 aa13.07□□□□□ -0.32
CDH11-203ENST00000562325 WFDC10BQ8IUB3 73 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms