RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 PXDC1Q5TGL8 231 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 STX12Q86Y82 276 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 SLC7A5P1Q8MH63 180 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 OR10J6PQ8NGY7 276 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 C16orf74Q96GX8 76 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 AQP10Q96PS8 301 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 GGACTQ9BVM4 153 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 DNAJC4Q9NNZ3 241 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 NOP10Q9NPE3 64 aaKnown RBP5.82□□□□□ -1.48
GINS3-204ENST00000561952 MBD2Q9UBB5 411 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 RNF24Q9Y225 148 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 PXMP4Q9Y6I8 212 aa5.82□□□□□ -1.48
GINS3-204ENST00000561952 DNAH11Q96DT5 4516 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 BCL2L11O43521 198 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 IGLC2P0DOY2 106 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 SULT1A1P50225 295 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 TAS2R60P59551 318 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 GFI1BQ5VTD9 330 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 LINC00336Q6ZUF6 198 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 TMEM256Q8N2U0 113 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 TMEM252Q8N6L7 170 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 INO80EQ8NBZ0 244 aaPredicted RBP5.81□□□□□ -1.48
GINS3-204ENST00000561952 OR1L4Q8NGR5 311 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 BLNKQ8WV28 456 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 PHYHIPLQ96FC7 376 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 FAM210BQ96KR6 192 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 PFDN5Q99471 154 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 KRTAP4-2Q9BYR5 136 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 C11orf1Q9H5F2 150 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 LYRM2Q9NU23 88 aaPredicted RBP5.81□□□□□ -1.48
GINS3-204ENST00000561952 SLC39A9Q9NUM3 307 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 MED9Q9NWA0 146 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 WDR83OSQ9Y284 106 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 KIAA1109Q2LD37 5005 aa5.81□□□□□ -1.48
GINS3-204ENST00000561952 TRAV12-3A0A0B4J271 114 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 KANTRA0A1W2PQU2 76 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 M0R3E3 92 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 ATP5G1P05496 136 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 PYYP10082 97 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 TSPOP30536 169 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 ATP5G3P48201 142 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 HBG1P69891 147 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 HBG2P69892 147 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 ERCC8Q13216 396 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 OR5I1Q13606 314 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 CLINT1Q14677 625 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 GCSAMLQ5JQS6 135 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 C15orf53Q8NAA6 179 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 STOML3Q8TAV4 291 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 TMEM263Q8WUH6 116 aaKnown RBP5.8□□□□□ -1.48
GINS3-204ENST00000561952 ARPC5LQ9BPX5 153 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 KRTAP17-1Q9BYP8 105 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 ZNF586Q9NXT0 402 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 OR5AC2Q9NZP5 309 aa5.8□□□□□ -1.48
GINS3-204ENST00000561952 TIMM8BQ9Y5J9 83 aaPredicted RBP5.8□□□□□ -1.48
GINS3-204ENST00000561952 A0A0J9YY99 117 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 GAGE12BA1L429 117 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 SNURFLB1AK76 121 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 E5RGE8 158 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 H7BYZ3 331 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 TAAR5O14804 337 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 GAGE7O76087 117 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 RLN2P04090 185 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 GAGE12FP0CL80 117 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 GAGE12GP0CL81 117 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 GAGE12IP0CL82 117 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 CT45A10P0DMU9 189 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 LEPP41159 167 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 NHLH2Q02577 135 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 VWC2Q2TAL6 325 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 LGALS9BQ3B8N2 356 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 CCDC28AQ8IWP9 274 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 EXOC3-AS1Q8N2X6 119 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 OR5C1Q8NGR4 320 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 RNASE8Q8TDE3 154 aaKnown RBP5.79□□□□□ -1.48
GINS3-204ENST00000561952 RNF141Q8WVD5 230 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 SAT2Q96F10 170 aaPredicted RBP5.79□□□□□ -1.48
GINS3-204ENST00000561952 NPCDR1Q9BY65 106 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 CYTL1Q9NRR1 136 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 TIMM9Q9Y5J7 89 aa5.79□□□□□ -1.48
GINS3-204ENST00000561952 IGKV2-40A0A087WW87 121 aaPredicted RBP5.78□□□□□ -1.48
GINS3-204ENST00000561952 CBY3A6NI87 242 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 IGKV2D-40P01614 121 aaPredicted RBP5.78□□□□□ -1.48
GINS3-204ENST00000561952 NMBP08949 121 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 RPL29P47914 159 aaKnown RBP5.78□□□□□ -1.48
GINS3-204ENST00000561952 RAB14P61106 215 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 BTN1A1Q13410 526 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 RNF212Q495C1 297 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 C1orf134Q5TEV5 83 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 FAM122CQ6P4D5 195 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 Q6ZR54 194 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 SLC25A2Q9BXI2 301 aa5.78□□□□□ -1.48
GINS3-204ENST00000561952 TRBV19A0A075B6N1 114 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 TRAV26-1A0A087WT03 109 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 EIF3GO75821 320 aaKnown RBP eCLIP5.77□□□□□ -1.49
GINS3-204ENST00000561952 OR10J4P0C629 311 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 TPT1P13693 172 aaKnown RBP5.77□□□□□ -1.49
GINS3-204ENST00000561952 RPL12P30050 165 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 249.2 ms