RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RPL7P18124 248 aaKnown RBP4.98□□□□□ -1.61
CAPN3-210ENST00000561817 GNG4P50150 75 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 FOXE3Q13461 319 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 OR5I1Q13606 314 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 OR4F17Q8NGA8 305 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 SFRP2Q96HF1 295 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 IMMP2LQ96T52 175 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 NPFFR1Q9GZQ6 430 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 GNB4Q9HAV0 340 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 OSTCQ9NRP0 149 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 V9GYV3 84 aa4.98□□□□□ -1.61
CAPN3-210ENST00000561817 NSD1Q96L73 2696 aaPredicted RBP4.98□□□□□ -1.61
CAPN3-210ENST00000561817 FN1P02751 2386 aaKnown RBP4.97□□□□□ -1.61
CAPN3-210ENST00000561817 TRAV8-2A0A0B4J237 113 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 DNAJC9-AS1A6NH13 148 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 DIRC3C9JPN6 131 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 M0R3E3 92 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 PPP1R2P9O14990 202 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 ZNF207O43670 478 aaKnown RBP4.97□□□□□ -1.61
CAPN3-210ENST00000561817 TYMSP04818 313 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 ELANEP08246 267 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 GALR1P47211 349 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 SEC61GP60059 68 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 FOXL1Q12952 345 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 TCTEX1D4Q5JR98 221 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 FAM159AQ6UWV7 190 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 FAM231DQ6ZW35 169 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 Q86TA4 180 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 GPHB5Q86YW7 130 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 OR8I2Q8N0Y5 310 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 OR10G8Q8NGN5 311 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 SMIM12Q96EX1 92 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 GPR82Q96P67 336 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 DUX5Q96PT3 197 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 METTL26Q96S19 204 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 ZNF331Q9NQX6 463 aaPredicted RBP4.97□□□□□ -1.61
CAPN3-210ENST00000561817 URGCP-MRPS24S4R325 110 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 MTORP42345 2549 aa4.97□□□□□ -1.61
CAPN3-210ENST00000561817 NF1P21359 2839 aa4.96□□□□□ -1.61
CAPN3-210ENST00000561817 CUBNO60494 3623 aa4.96□□□□□ -1.61
CAPN3-210ENST00000561817 TRAV8-1A0A0A6YYK1 113 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 K7EMT4 169 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 SOCS3O14543 225 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 LGALS1P09382 135 aaKnown RBP4.96□□□□□ -1.62
CAPN3-210ENST00000561817 HLA-DMBP28068 263 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 S100A7P31151 101 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 PSG9Q00887 426 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 LINC00322Q6ZN03 302 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-210ENST00000561817 Q6ZSV7 163 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 GOLT1AQ6ZVE7 132 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 COX8CQ7Z4L0 72 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 TMEM75Q8N9X5 138 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 ZNF418Q8TF45 676 aaPredicted RBP4.96□□□□□ -1.62
CAPN3-210ENST00000561817 FAM210BQ96KR6 192 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 SGK494Q96LW2 274 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 RNASE7Q9H1E1 156 aaKnown RBP4.96□□□□□ -1.62
CAPN3-210ENST00000561817 CLEC5AQ9NY25 188 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 IL36BQ9NZH7 164 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 FAM30AQ9NZY2 134 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 ZNF492Q9P255 531 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 MLXQ9UH92 298 aa4.96□□□□□ -1.62
CAPN3-210ENST00000561817 IGHV3OR16-13A0A075B7E8 117 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 IGHV3-49A0A0A0MS15 119 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 IGHV3-74A0A0B4J1X5 117 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 IGHV3-66A0A0C4DH42 116 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 IGHV7-4-1A0A0J9YVY3 117 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 A0A1W2PPQ1 181 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 SMIM27A0A1W2PRY6 76 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 CBY3A6NI87 242 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 TCF21O43680 179 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 GCSHP23434 173 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 SLC35B1P78383 322 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 FLI1Q01543 452 aaPredicted RBP4.95□□□□□ -1.62
CAPN3-210ENST00000561817 PSG3Q16557 428 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 IGFL4Q6B9Z1 124 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 C18orf65Q6ZTR6 163 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 STHQ8IWL8 128 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 TMEM183AQ8IXX5 376 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 C20orf173Q96LM9 149 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 UBE2E2Q96LR5 201 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 PSG8Q9UQ74 426 aa4.95□□□□□ -1.62
CAPN3-210ENST00000561817 TRAV9-1A0A075B6T8 112 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 A0A087WW49 117 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 TMEM213A2RRL7 107 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 ZNF705FA8MVS1 300 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-210ENST00000561817 A8MWP6 167 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 PRAC2D3DTV9 90 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 CHEK1O14757 476 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 PRB4P10163 310 aaPredicted RBP4.94□□□□□ -1.62
CAPN3-210ENST00000561817 RPS10P46783 165 aaKnown RBP4.94□□□□□ -1.62
CAPN3-210ENST00000561817 MEOX2P50222 304 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 CRIP1P50238 77 aa4.94□□□□□ -1.62
CAPN3-210ENST00000561817 RIPPLY3P57055 190 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms