RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 DYSFO75923 2080 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 ATP5LO75964 103 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 MEIG1Q5JSS6 88 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 CD177Q8N6Q3 437 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 MAPKAPK5-AS1Q8N8E1 139 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 AJUBAQ96IF1 538 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 BBC3Q96PG8 261 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-206ENST00000561781 FAM173AQ9BQD7 235 aa14.74□□□□□ -0.05
RAB40C-206ENST00000561781 IQCF6A8MYZ5 107 aa14.73□□□□□ -0.05
RAB40C-206ENST00000561781 NRGNQ92686 78 aa14.73□□□□□ -0.05
RAB40C-206ENST00000561781 PRB1P04280 392 aa14.73□□□□□ -0.05
RAB40C-206ENST00000561781 SAA2P0DJI9 122 aaPredicted RBP14.73□□□□□ -0.05
RAB40C-206ENST00000561781 POU2AF1Q16633 256 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 IGFL2Q6UWQ7 119 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 MDS2Q8NDY4 140 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 RASL11BQ9BPW5 248 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 C12orf49Q9H741 205 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 LOC107984156A0A0G2JMH3 177 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 ARL17AQ8IVW1 177 aa14.72□□□□□ -0.05
RAB40C-206ENST00000561781 TRAV4A0A0B4J268 109 aa14.71□□□□□ -0.05
RAB40C-206ENST00000561781 MYMXA0A1B0GTQ4 84 aa14.71□□□□□ -0.05
RAB40C-206ENST00000561781 UBE2D3P61077 147 aa14.71□□□□□ -0.05
RAB40C-206ENST00000561781 UBE2D2P62837 147 aa14.71□□□□□ -0.05
RAB40C-206ENST00000561781 Q9H3A6 140 aa14.71□□□□□ -0.05
RAB40C-206ENST00000561781 NCBP2LA6PVI3 153 aaKnown RBP14.71□□□□□ -0.06
RAB40C-206ENST00000561781 AMN1Q8IY45 258 aa14.71□□□□□ -0.06
RAB40C-206ENST00000561781 CSDC2Q9Y534 153 aaKnown RBP14.71□□□□□ -0.06
RAB40C-206ENST00000561781 TRBV6-1A0A0K0K1D8 114 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 UPK2O00526 184 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 IGHV3-48P01763 117 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 PF4V1P10720 104 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 PRNTQ86SH4 94 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 TPPP3Q9BW30 176 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 MRPL51Q4U2R6 128 aaKnown RBP14.7□□□□□ -0.06
RAB40C-206ENST00000561781 MBNL2Q5VZF2 373 aaKnown RBP14.7□□□□□ -0.06
RAB40C-206ENST00000561781 Q71RC1 249 aaPredicted RBP14.7□□□□□ -0.06
RAB40C-206ENST00000561781 ANKRD29Q8N6D5 301 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 Q8NA96 180 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 OR10J6PQ8NGY7 276 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 FOXC2Q99958 501 aa14.7□□□□□ -0.06
RAB40C-206ENST00000561781 PRDX2P32119 198 aa14.69□□□□□ -0.06
RAB40C-206ENST00000561781 CKS2P33552 79 aa14.69□□□□□ -0.06
RAB40C-206ENST00000561781 FLYWCH2Q96CP2 140 aaKnown RBP14.69□□□□□ -0.06
RAB40C-206ENST00000561781 MDFICQ9P1T7 246 aa14.69□□□□□ -0.06
RAB40C-206ENST00000561781 TRAV8-1A0A0A6YYK1 113 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 LINC01546A6NGU7 62 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 H3BTX0 84 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 IGKV1-16P04430 117 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 KLF14Q8TD94 323 aaPredicted RBP14.68□□□□□ -0.06
RAB40C-206ENST00000561781 NPIPB3Q92617 1050 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 TMEM160Q9NX00 188 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 FAM208BQ5VWN6 2430 aa14.68□□□□□ -0.06
RAB40C-206ENST00000561781 LINC01549A6NIU2 74 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 NPYP01303 97 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 LEPP41159 167 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 IGFL3Q6UXB1 125 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 CXXC4Q9H2H0 198 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 IGKV1D-37A0A075B6S9 117 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 LINC01548A6NM66 108 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 ZFP2Q6ZN57 461 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 ZNF462Q96JM2 2506 aa14.67□□□□□ -0.06
RAB40C-206ENST00000561781 TRAV40A0A0B4J280 105 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 IGLV2-11P01706 119 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 ORM2P19652 201 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 RASL10AQ92737 203 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 OTORQ9NRC9 128 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 FZR1Q9UM11 496 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 TRAV8-2A0A0B4J237 113 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 SCGB1C2P0DMR2 95 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 THAP8Q8NA92 274 aa14.66□□□□□ -0.06
RAB40C-206ENST00000561781 TRAV17A0A0B4J275 112 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 HOXB4P17483 251 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-206ENST00000561781 MAGEA5P43359 124 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 ERHP84090 104 aaKnown RBP14.65□□□□□ -0.06
RAB40C-206ENST00000561781 CALYQ9NYX4 217 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 DNAJC13O75165 2243 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 CRLF1O75462 422 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 DNAJC30Q96LL9 226 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 TTTY12Q9BZ98 90 aa14.65□□□□□ -0.06
RAB40C-206ENST00000561781 IGKV1D-17A0A075B6S4 117 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 TMSB15BA0A087X1C1 80 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 A0A1W2PPI3 338 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 TMEM213A2RRL7 107 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 ZNF785A8K8V0 405 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 H3BVH4 76 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 GP9P14770 177 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 TMEM78Q5T7P6 136 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 GOLT1AQ6ZVE7 132 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 TMEM190Q8WZ59 177 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 TRGV9Q99603 122 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 TNFRSF1AP19438 455 aa14.64□□□□□ -0.07
RAB40C-206ENST00000561781 NXT2Q9NPJ8 142 aaKnown RBP14.64□□□□□ -0.07
RAB40C-206ENST00000561781 MRPL36Q9P0J6 103 aaKnown RBP14.64□□□□□ -0.07
RAB40C-206ENST00000561781 WIPF1O43516 503 aa14.63□□□□□ -0.07
RAB40C-206ENST00000561781 TCL1BO95988 128 aa14.63□□□□□ -0.07
RAB40C-206ENST00000561781 SAA1P0DJI8 122 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-206ENST00000561781 UBE2D1P51668 147 aa14.63□□□□□ -0.07
RAB40C-206ENST00000561781 LYZL1Q6UWQ5 148 aa14.63□□□□□ -0.07
RAB40C-206ENST00000561781 ZNRF1Q8ND25 227 aa14.63□□□□□ -0.07
RAB40C-206ENST00000561781 SPRNQ5BIV9 151 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms