RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 C9orf47Q6ZRZ4 202 aa16.84■□□□□ 0.29
SMPD3-202ENST00000561749 LINC00477Q96M19 166 aa16.84■□□□□ 0.29
SMPD3-202ENST00000561749 SMIM9A6NGZ8 99 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 SEC11BP0C7V7 166 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 FHITP49789 147 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 TMEM78Q5T7P6 136 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 GFI1BQ5VTD9 330 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 Q8TAT8 98 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 CMTM2Q8TAZ6 248 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 ODF3Q96PU9 254 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 LINC01587Q99440 93 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 TMPRSS5Q9H3S3 457 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 CELA1Q9UNI1 258 aa16.83■□□□□ 0.28
SMPD3-202ENST00000561749 DNAH7Q8WXX0 4024 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 DIRC3C9JPN6 131 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 GNG5P63218 68 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 EIF5AP63241 154 aaKnown RBP16.82■□□□□ 0.28
SMPD3-202ENST00000561749 RRN3P1Q2M238 152 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 FAM74A1Q5RGS3 127 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 SUN5Q8TC36 379 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 RXFP4Q8TDU9 374 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 TMED6Q8WW62 240 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 TMEM167BQ9NRX6 74 aa16.82■□□□□ 0.28
SMPD3-202ENST00000561749 LOC102723971A0A1B0GUV8 181 aa16.81■□□□□ 0.28
SMPD3-202ENST00000561749 MAP1LC3B2A6NCE7 125 aa16.81■□□□□ 0.28
SMPD3-202ENST00000561749 SLC25A5P05141 298 aaKnown RBP16.81■□□□□ 0.28
SMPD3-202ENST00000561749 TPT1P13693 172 aaKnown RBP16.81■□□□□ 0.28
SMPD3-202ENST00000561749 MAP1LC3BQ9GZQ8 125 aa16.81■□□□□ 0.28
SMPD3-202ENST00000561749 TRAV12-3A0A0B4J271 114 aa16.8■□□□□ 0.28
SMPD3-202ENST00000561749 HTN1P15515 57 aa16.8■□□□□ 0.28
SMPD3-202ENST00000561749 FAM213BQ8TBF2 198 aa16.8■□□□□ 0.28
SMPD3-202ENST00000561749 FAM19A4Q96LR4 140 aa16.8■□□□□ 0.28
SMPD3-202ENST00000561749 ZNF492Q9P255 531 aa16.8■□□□□ 0.28
SMPD3-202ENST00000561749 ZNF138P52744 262 aa16.79■□□□□ 0.28
SMPD3-202ENST00000561749 UBE2G2P60604 165 aa16.79■□□□□ 0.28
SMPD3-202ENST00000561749 GOLT1AQ6ZVE7 132 aa16.79■□□□□ 0.28
SMPD3-202ENST00000561749 ZNF767PQ75MW2 155 aa16.79■□□□□ 0.28
SMPD3-202ENST00000561749 TMEM256Q8N2U0 113 aa16.79■□□□□ 0.28
SMPD3-202ENST00000561749 RBAKDNA6NC62 111 aa16.78■□□□□ 0.28
SMPD3-202ENST00000561749 AZU1P20160 251 aa16.78■□□□□ 0.28
SMPD3-202ENST00000561749 BTN1A1Q13410 526 aa16.78■□□□□ 0.28
SMPD3-202ENST00000561749 ZFP69Q49AA0 526 aa16.78■□□□□ 0.28
SMPD3-202ENST00000561749 STOML3Q8TAV4 291 aa16.78■□□□□ 0.28
SMPD3-202ENST00000561749 GGTLC3B5MD39 225 aa16.77■□□□□ 0.28
SMPD3-202ENST00000561749 RNASE4P34096 147 aaKnown RBP16.77■□□□□ 0.28
SMPD3-202ENST00000561749 SUMO1P63165 101 aaKnown RBP16.77■□□□□ 0.28
SMPD3-202ENST00000561749 PRR9Q5T870 116 aa16.77■□□□□ 0.28
SMPD3-202ENST00000561749 C9orf62Q8N4C0 152 aa16.77■□□□□ 0.28
SMPD3-202ENST00000561749 ZFAND2AQ8N6M9 145 aa16.77■□□□□ 0.28
SMPD3-202ENST00000561749 PHLDA1Q8WV24 401 aaPredicted RBP16.77■□□□□ 0.28
SMPD3-202ENST00000561749 YTHDF2Q9Y5A9 579 aaKnown RBP16.77■□□□□ 0.28
SMPD3-202ENST00000561749 A0A1B0GV50 99 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 C7orf71A4D174 169 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 TMEM189A5PLL7 270 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 KLLNB2CW77 178 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 UMAD1C9J7I0 102 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 GPX1P07203 203 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 CRISP2P16562 243 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 TAS2R60P59551 318 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 C5orf17Q8NAS9 161 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 C20orf144Q9BQM9 153 aa16.76■□□□□ 0.27
SMPD3-202ENST00000561749 TRAV8-1A0A0A6YYK1 113 aa16.75■□□□□ 0.27
SMPD3-202ENST00000561749 H7BYZ3 331 aa16.75■□□□□ 0.27
SMPD3-202ENST00000561749 SGK494Q96LW2 274 aa16.75■□□□□ 0.27
SMPD3-202ENST00000561749 NIPSNAP3BQ9BS92 247 aa16.75■□□□□ 0.27
SMPD3-202ENST00000561749 C12orf74Q32Q52 190 aa16.74■□□□□ 0.27
SMPD3-202ENST00000561749 FAM222AQ5U5X8 452 aa16.74■□□□□ 0.27
SMPD3-202ENST00000561749 CEMP1Q6PRD7 247 aaPredicted RBP16.74■□□□□ 0.27
SMPD3-202ENST00000561749 Q6ZQT7 251 aa16.74■□□□□ 0.27
SMPD3-202ENST00000561749 Q6ZTC4 211 aa16.74■□□□□ 0.27
SMPD3-202ENST00000561749 SFT2D1Q8WV19 159 aa16.74■□□□□ 0.27
SMPD3-202ENST00000561749 A0A1W2PRE2 83 aa16.73■□□□□ 0.27
SMPD3-202ENST00000561749 NUPR2A6NF83 97 aa16.73■□□□□ 0.27
SMPD3-202ENST00000561749 TCRAP04437 139 aa16.73■□□□□ 0.27
SMPD3-202ENST00000561749 SPART-AS1P0CW21 52 aa16.73■□□□□ 0.27
SMPD3-202ENST00000561749 NKX2-5P52952 324 aaPredicted RBP16.73■□□□□ 0.27
SMPD3-202ENST00000561749 DKK2Q9UBU2 259 aa16.73■□□□□ 0.27
SMPD3-202ENST00000561749 STARD9Q9P2P6 4700 aa16.72■□□□□ 0.27
SMPD3-202ENST00000561749 SLC51BQ86UW2 128 aa16.72■□□□□ 0.27
SMPD3-202ENST00000561749 ARL6IP6Q8N6S5 226 aa16.72■□□□□ 0.27
SMPD3-202ENST00000561749 MBD3L1Q8WWY6 194 aa16.72■□□□□ 0.27
SMPD3-202ENST00000561749 EPDR1Q9UM22 224 aa16.72■□□□□ 0.27
SMPD3-202ENST00000561749 PLAC8L1A1L4L8 177 aa16.71■□□□□ 0.27
SMPD3-202ENST00000561749 FAM74A7A6NL05 159 aa16.71■□□□□ 0.27
SMPD3-202ENST00000561749 IFNA7P01567 189 aa16.71■□□□□ 0.27
SMPD3-202ENST00000561749 NMBP08949 121 aa16.71■□□□□ 0.27
SMPD3-202ENST00000561749 DPPA3Q6W0C5 159 aa16.71■□□□□ 0.27
SMPD3-202ENST00000561749 ZNF324O75467 553 aaPredicted RBP16.7■□□□□ 0.26
SMPD3-202ENST00000561749 C16orf74Q96GX8 76 aa16.7■□□□□ 0.26
SMPD3-202ENST00000561749 TRBV7-9A0A0J9YWB2 115 aa16.69■□□□□ 0.26
SMPD3-202ENST00000561749 H2AFB1P0C5Y9 115 aa16.69■□□□□ 0.26
SMPD3-202ENST00000561749 EIF5AL1Q6IS14 154 aaKnown RBP16.69■□□□□ 0.26
SMPD3-202ENST00000561749 CCDC28AQ8IWP9 274 aa16.69■□□□□ 0.26
SMPD3-202ENST00000561749 RNASE8Q8TDE3 154 aaKnown RBP16.69■□□□□ 0.26
SMPD3-202ENST00000561749 TVP23CQ96ET8 276 aa16.69■□□□□ 0.26
SMPD3-202ENST00000561749 PYGO2Q9BRQ0 406 aa16.69■□□□□ 0.26
SMPD3-202ENST00000561749 CSMD3Q7Z407 3707 aa16.69■□□□□ 0.26
SMPD3-202ENST00000561749 SERTM2A0A1B0GWG4 89 aa16.68■□□□□ 0.26
SMPD3-202ENST00000561749 F6UZH7 168 aa16.68■□□□□ 0.26
SMPD3-202ENST00000561749 K7EQM0 130 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms