RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CYCSP99999 105 aaKnown RBP7.21□□□□□ -1.26
CLK3-205ENST00000561673 PDE6HQ13956 83 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 CLINT1Q14677 625 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 MIR17HGQ75NE6 70 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 CCDC28AQ8IWP9 274 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 EXOC3-AS1Q8N2X6 119 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 FAM167A-AS1Q96KT0 104 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 MARVELD1Q9BSK0 173 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 SLC25A2Q9BXI2 301 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 PTTG2Q9NZH5 202 aa7.21□□□□□ -1.26
CLK3-205ENST00000561673 LINC00612Q8N6U2 182 aa7.2□□□□□ -1.26
CLK3-205ENST00000561673 PPP1R1CQ8WVI7 109 aa7.2□□□□□ -1.26
CLK3-205ENST00000561673 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
CLK3-205ENST00000561673 ATG101Q9BSB4 218 aa7.2□□□□□ -1.26
CLK3-205ENST00000561673 WDR61Q9GZS3 305 aaKnown RBP7.2□□□□□ -1.26
CLK3-205ENST00000561673 AGPAT4-IT1Q9H0P7 198 aa7.2□□□□□ -1.26
CLK3-205ENST00000561673 PRELID1Q9Y255 219 aa7.2□□□□□ -1.26
CLK3-205ENST00000561673 ZNF324O75467 553 aaPredicted RBP7.19□□□□□ -1.26
CLK3-205ENST00000561673 SLC25A5P05141 298 aaKnown RBP7.19□□□□□ -1.26
CLK3-205ENST00000561673 NBEAP1P0C6P0 100 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
CLK3-205ENST00000561673 CD300CQ08708 224 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 ICAM4Q14773 271 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 RNF141Q8WVD5 230 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 FAM19A4Q96LR4 140 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 PYGO2Q9BRQ0 406 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 OR51M1Q9H341 326 aa7.19□□□□□ -1.26
CLK3-205ENST00000561673 IGKV2-40A0A087WW87 121 aaPredicted RBP7.18□□□□□ -1.26
CLK3-205ENST00000561673 GAGE12BA1L429 117 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 C7orf71A4D174 169 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 SNURFLB1AK76 121 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 KLLNB2CW77 178 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 SSNA1O43805 119 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 GAGE7O76087 117 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 MPC2O95563 127 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 IGKV2D-40P01614 121 aaPredicted RBP7.18□□□□□ -1.26
CLK3-205ENST00000561673 GAGE12FP0CL80 117 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 GAGE12GP0CL81 117 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 GAGE12IP0CL82 117 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 HOXA5P20719 270 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 RNASE4P34096 147 aaKnown RBP7.18□□□□□ -1.26
CLK3-205ENST00000561673 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
CLK3-205ENST00000561673 OR5I1Q13606 314 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 C1orf134Q5TEV5 83 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 FAM122CQ6P4D5 195 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 C9orf47Q6ZRZ4 202 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 ZNRF2Q8NHG8 242 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 FXYD5Q96DB9 178 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 ATP5SQ99766 215 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 VGLL1Q99990 258 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 MRPL18Q9H0U6 180 aaKnown RBP7.18□□□□□ -1.26
CLK3-205ENST00000561673 AAMDCQ9H7C9 122 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 FUT9Q9Y231 359 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
CLK3-205ENST00000561673 TRAV26-1A0A087WT03 109 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 C17orf112F2Z3M2 114 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 OR10J4P0C629 311 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 CRISP2P16562 243 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 M6PRP20645 277 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 CCL18P55774 89 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 DEFA1P59665 94 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 DEFA3P59666 94 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 BTN1A1Q13410 526 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 Q6ZTI0 123 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 C11orf72Q8NBR9 251 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 MRPL32Q9BYC8 188 aaKnown RBP7.17□□□□□ -1.26
CLK3-205ENST00000561673 GSN-AS1Q9NRJ2 163 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 KCNIP2Q9NS61 270 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 HSPB11Q9Y547 144 aa7.17□□□□□ -1.26
CLK3-205ENST00000561673 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 A0A0J9YY99 117 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 GPX1P07203 203 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 NMBP08949 121 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 RPL12P30050 165 aaKnown RBP7.16□□□□□ -1.26
CLK3-205ENST00000561673 ANXA2RQ3ZCQ2 193 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 SOHLH1Q5JUK2 328 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 FFAR4Q5NUL3 377 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 TMEM78Q5T7P6 136 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 PRR9Q5T870 116 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 Q6ZQT7 251 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 SSX7Q7RTT5 188 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 RXFP4Q8TDU9 374 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 GNPNAT1Q96EK6 184 aaPredicted RBP7.16□□□□□ -1.26
CLK3-205ENST00000561673 ZNF503Q96F45 646 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 PHYHIPLQ96FC7 376 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 LINC00467Q9BRT7 94 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 SMIM3Q9BZL3 60 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 TMPRSS5Q9H3S3 457 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 ZNF492Q9P255 531 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
CLK3-205ENST00000561673 NACAE9PAV3 2078 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 NBDYA0A0U1RRE5 68 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 OR7C2O60412 319 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 PET100P0DJ07 73 aa7.15□□□□□ -1.26
CLK3-205ENST00000561673 RANP62826 216 aaKnown RBP7.15□□□□□ -1.26
CLK3-205ENST00000561673 EIF4E3Q8N5X7 224 aaKnown RBP7.15□□□□□ -1.26
CLK3-205ENST00000561673 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 229.1 ms