RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 C10orf91Q5T1B1 145 aa8.31□□□□□ -1.08
CARMIL3-204ENST00000561354 C6orf223Q8N319 242 aa8.31□□□□□ -1.08
CARMIL3-204ENST00000561354 RSG1Q9BU20 258 aa8.31□□□□□ -1.08
CARMIL3-204ENST00000561354 TREM1Q9NP99 234 aa8.31□□□□□ -1.08
CARMIL3-204ENST00000561354 UBE2L5PA0A1B0GUS4 154 aa8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 ZNF705GA8MUZ8 300 aaPredicted RBP8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 INSP01308 110 aa8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 MAPKAPK5-AS1Q8N8E1 139 aa8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 OR1B1Q8NGR6 318 aa8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 GPR82Q96P67 336 aa8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
CARMIL3-204ENST00000561354 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 F8W036 122 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 SNAPINO95295 136 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 APOC3P02656 99 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 PRM2P04554 102 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 DEFB130BP0DP73 79 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 DEFB130AP0DP74 79 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 FGF7P21781 194 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 S100A7P31151 101 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 TAGLN2P37802 199 aaKnown RBP8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 CCL18P55774 89 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 GUK1Q16774 197 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 WDR83OSQ9Y284 106 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 HSPG2P98160 4391 aa8.29□□□□□ -1.08
CARMIL3-204ENST00000561354 TRAV8-2A0A0B4J237 113 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 CBY3A6NI87 242 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 PRSS46E5RG02 174 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 F5H768 121 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 M0R2Z0 102 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 NDUFS6O75380 124 aaKnown RBP8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 IFNA1P01562 189 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 ATP5G1P05496 136 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 SFTA3P0C7M3 94 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 ATP5G3P48201 142 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 LINC00588Q9Y4M8 146 aa8.28□□□□□ -1.08
CARMIL3-204ENST00000561354 NUDT3O95989 172 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 ORM2P19652 201 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 AZU1P20160 251 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 FHITP49789 147 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 RAB31Q13636 194 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 Q8N1X5 172 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 TMEM256Q8N2U0 113 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 SUN5Q8TC36 379 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 SFT2D1Q8WV19 159 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 NPCDR1Q9BY65 106 aa8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 NKX6-2Q9C056 277 aaPredicted RBP8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 EIF5A2Q9GZV4 153 aaKnown RBP8.27□□□□□ -1.09
CARMIL3-204ENST00000561354 RBFOX3A6NFN3 312 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 AGPAT2O15120 278 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 GATA2P23769 480 aaPredicted RBP8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 PPT1P50897 306 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 TAS2R60P59551 318 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 ACOT6Q3I5F7 207 aaPredicted RBP8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 KHDC3LQ587J8 217 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 RNF182Q8N6D2 247 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 OR10G4Q8NGN3 311 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 LINC01587Q99440 93 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 NPVFQ9HCQ7 196 aa8.26□□□□□ -1.09
CARMIL3-204ENST00000561354 TRAV12-2A0A075B6T6 113 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 CTXND1A0A1B0GTU2 59 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 H3BRN7 92 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 RPL7P18124 248 aaKnown RBP8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 SRSF3P84103 164 aaKnown RBP8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 AKR1C1Q04828 323 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 ZNF506Q5JVG8 444 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 ZNF493Q6ZR52 646 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 SSX7Q7RTT5 188 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 ZNF738Q8NE65 137 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 SHANK2-AS3Q9BTD1 123 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 SLC25A39Q9BZJ4 359 aaPredicted RBP8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 Q9H8V8 135 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 TIMM8BQ9Y5J9 83 aaPredicted RBP8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
CARMIL3-204ENST00000561354 MAP1LC3B2A6NCE7 125 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 FFAR4Q5NUL3 377 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 TEPPQ6URK8 271 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 TMEM144Q7Z5S9 345 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 OR8A1Q8NGG7 326 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 ZNF503Q96F45 646 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 MAP1LC3BQ9GZQ8 125 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 MANBALQ9NQG1 85 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 SLC39A9Q9NUM3 307 aa8.24□□□□□ -1.09
CARMIL3-204ENST00000561354 A0A087X0K7 114 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 SMCO3A2RU48 225 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 BCL2P10415 239 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 PLP1P60201 277 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 RHOBP62745 196 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 HIST1H1AQ02539 215 aaPredicted RBP8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 SPATA12Q7Z6I5 190 aa8.23□□□□□ -1.09
CARMIL3-204ENST00000561354 OR10G9Q8NGN4 311 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms