RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 IGKV2-40A0A087WW87 121 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-215ENST00000561187 ZNF253O75346 499 aa18.71■□□□□ 0.59
SNRPA1-215ENST00000561187 IGKV2D-40P01614 121 aaPredicted RBP18.71■□□□□ 0.59
SNRPA1-215ENST00000561187 SLC25A5P05141 298 aaKnown RBP18.71■□□□□ 0.59
SNRPA1-215ENST00000561187 TTC32Q5I0X7 151 aa18.71■□□□□ 0.59
SNRPA1-215ENST00000561187 HIST1H1EP10412 219 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 DAZ2Q13117 558 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 FAM122CQ6P4D5 195 aa18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 MRPL53Q96EL3 112 aaKnown RBP18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 ZNF503Q96F45 646 aa18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 NPCDR1Q9BY65 106 aa18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 AGPAT4-IT1Q9H0P7 198 aa18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 TMEM14CQ9P0S9 112 aa18.7■□□□□ 0.58
SNRPA1-215ENST00000561187 FAM240BA0A1B0GVZ2 78 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 IL15RAQ13261 267 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 MAPKAPK5-AS1Q8N8E1 139 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 C11orf72Q8NBR9 251 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 SLC25A2Q9BXI2 301 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 Q9H3A6 140 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 MRPS16Q9Y3D3 137 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 KLF12Q9Y4X4 402 aa18.69■□□□□ 0.58
SNRPA1-215ENST00000561187 KLLNB2CW77 178 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 IGHV3-53P01767 116 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 ICAM4Q14773 271 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 PRR9Q5T870 116 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 Q6ZQT7 251 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 MIR17HGQ75NE6 70 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 ZNF680Q8NEM1 530 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 VSIG2Q96IQ7 327 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 FUT9Q9Y231 359 aa18.68■□□□□ 0.58
SNRPA1-215ENST00000561187 SIX6O95475 246 aa18.67■□□□□ 0.58
SNRPA1-215ENST00000561187 EIF4E3Q8N5X7 224 aaKnown RBP18.67■□□□□ 0.58
SNRPA1-215ENST00000561187 UPK3BQ9BT76 320 aa18.67■□□□□ 0.58
SNRPA1-215ENST00000561187 AAMDCQ9H7C9 122 aa18.67■□□□□ 0.58
SNRPA1-215ENST00000561187 TP53TG3Q9ULZ0 132 aa18.67■□□□□ 0.58
SNRPA1-215ENST00000561187 A0A096LPF7 62 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 GPX1P07203 203 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 NHLH2Q02577 135 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 LRRC37A5PQ49AS3 106 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 FAM19A4Q96LR4 140 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 VGLL1Q99990 258 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 CCDC32Q9BV29 185 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 PRELID1Q9Y255 219 aa18.66■□□□□ 0.58
SNRPA1-215ENST00000561187 ZNF324O75467 553 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 CDK2AP2O75956 126 aa18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 PDE6HQ13956 83 aa18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 ATP6V1FQ16864 119 aa18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 OR5C1Q8NGR4 320 aa18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 LINC00477Q96M19 166 aa18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 MRPL16Q9NX20 251 aaKnown RBP18.65■□□□□ 0.58
SNRPA1-215ENST00000561187 OR10J4P0C629 311 aa18.64■□□□□ 0.57
SNRPA1-215ENST00000561187 KRTAP10-2P60368 255 aa18.64■□□□□ 0.57
SNRPA1-215ENST00000561187 Q8TAT8 98 aa18.64■□□□□ 0.57
SNRPA1-215ENST00000561187 CHAC2Q8WUX2 184 aa18.64■□□□□ 0.57
SNRPA1-215ENST00000561187 H3BNG1 76 aa18.63■□□□□ 0.57
SNRPA1-215ENST00000561187 RGS13O14921 159 aa18.63■□□□□ 0.57
SNRPA1-215ENST00000561187 MPDU1O75352 247 aa18.63■□□□□ 0.57
SNRPA1-215ENST00000561187 TMEM78Q5T7P6 136 aa18.63■□□□□ 0.57
SNRPA1-215ENST00000561187 FAM167A-AS1Q96KT0 104 aa18.63■□□□□ 0.57
SNRPA1-215ENST00000561187 TCL1AP56279 114 aa18.62■□□□□ 0.57
SNRPA1-215ENST00000561187 ANXA2RQ3ZCQ2 193 aa18.62■□□□□ 0.57
SNRPA1-215ENST00000561187 ZFAND2AQ8N6M9 145 aa18.62■□□□□ 0.57
SNRPA1-215ENST00000561187 OR5AC2Q9NZP5 309 aa18.62■□□□□ 0.57
SNRPA1-215ENST00000561187 LINC00315P59091 139 aa18.61■□□□□ 0.57
SNRPA1-215ENST00000561187 MZT2BQ6NZ67 158 aa18.61■□□□□ 0.57
SNRPA1-215ENST00000561187 C9orf47Q6ZRZ4 202 aa18.61■□□□□ 0.57
SNRPA1-215ENST00000561187 PHYHIPLQ96FC7 376 aa18.61■□□□□ 0.57
SNRPA1-215ENST00000561187 SPINK4O60575 86 aa18.6■□□□□ 0.57
SNRPA1-215ENST00000561187 CRISP2P16562 243 aa18.6■□□□□ 0.57
SNRPA1-215ENST00000561187 ARPC5LQ9BPX5 153 aa18.6■□□□□ 0.57
SNRPA1-215ENST00000561187 LINC00467Q9BRT7 94 aa18.6■□□□□ 0.57
SNRPA1-215ENST00000561187 OR51M1Q9H341 326 aa18.6■□□□□ 0.57
SNRPA1-215ENST00000561187 NBEAP1P0C6P0 100 aa18.59■□□□□ 0.57
SNRPA1-215ENST00000561187 PAXXQ9BUH6 204 aa18.59■□□□□ 0.57
SNRPA1-215ENST00000561187 IGHV1OR15-1A0A075B7D0 117 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 A0A1W2PPQ1 181 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 PAX4O43316 350 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 MUC21Q5SSG8 566 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 ENKURQ8TC29 256 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 FXYD5Q96DB9 178 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 NDUFA13Q9P0J0 144 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 ZNF492Q9P255 531 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 ICOSQ9Y6W8 199 aa18.58■□□□□ 0.56
SNRPA1-215ENST00000561187 OR7C2O60412 319 aa18.57■□□□□ 0.56
SNRPA1-215ENST00000561187 NXPH4O95158 308 aa18.57■□□□□ 0.56
SNRPA1-215ENST00000561187 FUSP35637 526 aaKnown RBP eCLIP18.57■□□□□ 0.56
SNRPA1-215ENST00000561187 ST6GAL2Q96JF0 529 aa18.57■□□□□ 0.56
SNRPA1-215ENST00000561187 C18orf15Q96N68 181 aa18.57■□□□□ 0.56
SNRPA1-215ENST00000561187 SLC25A31Q9H0C2 315 aa18.57■□□□□ 0.56
SNRPA1-215ENST00000561187 E5RGE8 158 aa18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 H0YIZ8 118 aa18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 EIF3GO75821 320 aaKnown RBP eCLIP18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 ASAH1Q13510 395 aa18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 IBA57Q5T440 356 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 C8orf49Q96NF6 230 aa18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 WDR61Q9GZS3 305 aaKnown RBP18.56■□□□□ 0.56
SNRPA1-215ENST00000561187 SIVA1O15304 175 aa18.55■□□□□ 0.56
SNRPA1-215ENST00000561187 ZNF138P52744 262 aa18.55■□□□□ 0.56
SNRPA1-215ENST00000561187 MRPL32Q9BYC8 188 aaKnown RBP18.54■□□□□ 0.56
SNRPA1-215ENST00000561187 RANP62826 216 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms