RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 OR7C2O60412 319 aa8.87□□□□□ -0.99
CHRNA3-208ENST00000561128 LEPP41159 167 aa8.87□□□□□ -0.99
CHRNA3-208ENST00000561128 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
CHRNA3-208ENST00000561128 C11orf72Q8NBR9 251 aa8.87□□□□□ -0.99
CHRNA3-208ENST00000561128 TP53TG3Q9ULZ0 132 aa8.87□□□□□ -0.99
CHRNA3-208ENST00000561128 F5H768 121 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 RTL8CO15255 209 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 ZNF324O75467 553 aaPredicted RBP8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 PET100P0DJ07 73 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 P0DMU3 169 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 FAM231AP0DMU4 169 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 FAM231CP0DMU5 169 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 HOXA5P20719 270 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 Q6ZTI0 123 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 C20orf144Q9BQM9 153 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 Q9H3A6 140 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 KCNIP2Q9NS61 270 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 PRELID1Q9Y255 219 aa8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 TIMM8BQ9Y5J9 83 aaPredicted RBP8.86□□□□□ -0.99
CHRNA3-208ENST00000561128 GAGE12BA1L429 117 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 C17orf112F2Z3M2 114 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 GAGE7O76087 117 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 GAGE12FP0CL80 117 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 GAGE12GP0CL81 117 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 GAGE12IP0CL82 117 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 CRISP2P16562 243 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 RNASE4P34096 147 aaKnown RBP8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 Q6ZR54 194 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 FAM210BQ96KR6 192 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 SH3BGRL3Q9H299 93 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 TMPRSS5Q9H3S3 457 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 GSN-AS1Q9NRJ2 163 aa8.85□□□□□ -0.99
CHRNA3-208ENST00000561128 A0A1B0GVY2 172 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 RNF222A6NCQ9 220 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 CBY3A6NI87 242 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 IFNA5P01569 189 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 SLC25A5P05141 298 aaKnown RBP8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 ATP5G1P05496 136 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 ATP5G3P48201 142 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 RANP62826 216 aaKnown RBP8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 ZNF493Q6ZR52 646 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 SSX7Q7RTT5 188 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 HSD17B11Q8NBQ5 300 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 AQP10Q96PS8 301 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 MED28Q9H204 178 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 AAMDCQ9H7C9 122 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 KLF12Q9Y4X4 402 aa8.84□□□□□ -0.99
CHRNA3-208ENST00000561128 HECTD4Q9Y4D8 3996 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 GNG5P63218 68 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 KHDC3LQ587J8 217 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 SCGB1C1Q8TD33 95 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 LINC00477Q96M19 166 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 PYGO2Q9BRQ0 406 aa8.83□□□□□ -1
CHRNA3-208ENST00000561128 A0A0J9YY99 117 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 NUDT3O95989 172 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 M6PRP20645 277 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 ATP6V0CP27449 155 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 ZNF138P52744 262 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 TVP23CQ96ET8 276 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 RPH3ALQ9UNE2 315 aa8.82□□□□□ -1
CHRNA3-208ENST00000561128 TRAV8-1A0A0A6YYK1 113 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 DIRC3C9JPN6 131 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 GIPP09681 153 aaPredicted RBP8.81□□□□□ -1
CHRNA3-208ENST00000561128 ARL14EPLP0DKL9 152 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 MUC21Q5SSG8 566 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 TMEM78Q5T7P6 136 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 C15orf53Q8NAA6 179 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 HYLS1Q96M11 299 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 LINC00467Q9BRT7 94 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 MRPL16Q9NX20 251 aaKnown RBP8.81□□□□□ -1
CHRNA3-208ENST00000561128 LINC00588Q9Y4M8 146 aa8.81□□□□□ -1
CHRNA3-208ENST00000561128 TRAV26-1A0A087WT03 109 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 FXYD6-FXYD2A0A087WZ82 144 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 SNURFLB1AK76 121 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 F6UZH7 168 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 SMLR1H3BR10 107 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 GPX1P07203 203 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 TCL1AP56279 114 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
CHRNA3-208ENST00000561128 ZNF726P1Q15940 193 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 ACOT6Q3I5F7 207 aaPredicted RBP8.8□□□□□ -1
CHRNA3-208ENST00000561128 RPL7L1Q6DKI1 246 aaKnown RBP8.8□□□□□ -1
CHRNA3-208ENST00000561128 CCDC28AQ8IWP9 274 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 EIF4E3Q8N5X7 224 aaKnown RBP8.8□□□□□ -1
CHRNA3-208ENST00000561128 OR10G4Q8NGN3 311 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 OR10G9Q8NGN4 311 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 OR10G7Q8NGN6 311 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 ZNRF2Q8NHG8 242 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 VSIG2Q96IQ7 327 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 KRTAP1-5Q9BYS1 174 aa8.8□□□□□ -1
CHRNA3-208ENST00000561128 FAT2Q9NYQ8 4349 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 TRGV1A0A0A0MS02 117 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 PGPA6NDG6 321 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 OR5I1Q13606 314 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 ZNF266Q14584 549 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 LGALS9BQ3B8N2 356 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 ANXA2RQ3ZCQ2 193 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms