RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 FHITP49789 147 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 FFAR4Q5NUL3 377 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 AMTNQ6UX39 209 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 OR4B1Q8NGF8 309 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 MBD3L1Q8WWY6 194 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 XCL2Q9UBD3 114 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 RNF24Q9Y225 148 aa7.71□□□□□ -1.18
TPM1-227ENST00000560970 A0A1B0GVY2 172 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 TMEM218A2RU14 115 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 ZNF705FA8MVS1 300 aaPredicted RBP7.7□□□□□ -1.18
TPM1-227ENST00000560970 P0DMU3 169 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 FAM231AP0DMU4 169 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 FAM231CP0DMU5 169 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 CNN1P51911 297 aaKnown RBP7.7□□□□□ -1.18
TPM1-227ENST00000560970 PEA15Q15121 130 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 PSG3Q16557 428 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 ACOT6Q3I5F7 207 aaPredicted RBP7.7□□□□□ -1.18
TPM1-227ENST00000560970 EBLN2Q6P2I7 272 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 CCDC28AQ8IWP9 274 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 ZNF503Q96F45 646 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 CLUHP3Q96NS8 147 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 SLC50A1Q9BRV3 221 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 C1QTNF4Q9BXJ3 329 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 KRTAP3-3Q9BYR6 98 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 KRTAP3-2Q9BYR7 98 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 TREM1Q9NP99 234 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 TMEM14CQ9P0S9 112 aa7.7□□□□□ -1.18
TPM1-227ENST00000560970 MUC4Q99102 2169 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 TRBV19A0A075B6N1 114 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 DEFB131BA0A096LNP1 70 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 CTXND1A0A1B0GTU2 59 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 MAP1LC3B2A6NCE7 125 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 PRAC2D3DTV9 90 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 NDUFB4O95168 129 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 MED14OSP0DP75 135 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 M6PRP20645 277 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 PSG9Q00887 426 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 HIST1H1AQ02539 215 aaPredicted RBP7.69□□□□□ -1.18
TPM1-227ENST00000560970 GUK1Q16774 197 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 SFT2D1Q8WV19 159 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 RPUSD4Q96CM3 377 aaKnown RBP7.69□□□□□ -1.18
TPM1-227ENST00000560970 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 MRPL32Q9BYC8 188 aaKnown RBP7.69□□□□□ -1.18
TPM1-227ENST00000560970 ACTR3CQ9C0K3 210 aaPredicted RBP7.69□□□□□ -1.18
TPM1-227ENST00000560970 MAP1LC3BQ9GZQ8 125 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 FUT9Q9Y231 359 aa7.69□□□□□ -1.18
TPM1-227ENST00000560970 PRSS29PA6NIE9 313 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 M0R2Z0 102 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 IFNA1P01562 189 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 OR10J4P0C629 311 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 HIST1H1EP10412 219 aaKnown RBP7.68□□□□□ -1.18
TPM1-227ENST00000560970 TAGLN2P37802 199 aaKnown RBP7.68□□□□□ -1.18
TPM1-227ENST00000560970 NUTF2P61970 127 aaKnown RBP7.68□□□□□ -1.18
TPM1-227ENST00000560970 ZNF726P1Q15940 193 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 C12orf74Q32Q52 190 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 C10orf91Q5T1B1 145 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 POM121L12Q8N7R1 296 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 OR10G4Q8NGN3 311 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 BLNKQ8WV28 456 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 FXYD5Q96DB9 178 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 SEC11CQ9BY50 192 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 CARHSP1Q9Y2V2 147 aaKnown RBP7.68□□□□□ -1.18
TPM1-227ENST00000560970 RYR1P21817 5038 aa7.68□□□□□ -1.18
TPM1-227ENST00000560970 RBFOX3A6NFN3 312 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 M0R3E3 92 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 CRXO43186 299 aaPredicted RBP7.67□□□□□ -1.18
TPM1-227ENST00000560970 ZNF253O75346 499 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 NDUFS6O75380 124 aaKnown RBP7.67□□□□□ -1.18
TPM1-227ENST00000560970 CDC34P49427 236 aaPredicted RBP7.67□□□□□ -1.18
TPM1-227ENST00000560970 SRSF3P84103 164 aaKnown RBP7.67□□□□□ -1.18
TPM1-227ENST00000560970 SPINK13Q1W4C9 94 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 ZNF506Q5JVG8 444 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 ZNF705AQ6ZN79 300 aaPredicted RBP7.67□□□□□ -1.18
TPM1-227ENST00000560970 C1orf158Q8N1D5 194 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 EXOC3-AS1Q8N2X6 119 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 PAXXQ9BUH6 204 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 EIF5A2Q9GZV4 153 aaKnown RBP7.67□□□□□ -1.18
TPM1-227ENST00000560970 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
TPM1-227ENST00000560970 LOC102723971A0A1B0GUV8 181 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 RTL8CO15255 209 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 OR7C2O60412 319 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 DUSP14O95147 198 aaKnown RBP7.66□□□□□ -1.18
TPM1-227ENST00000560970 SFTA3P0C7M3 94 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 PPT1P50897 306 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 RHOBP62745 196 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 CCL20P78556 96 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 PDE6HQ13956 83 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 KHDC3LQ587J8 217 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 FAM122CQ6P4D5 195 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 SVBPQ8N300 66 aa7.66□□□□□ -1.18
TPM1-227ENST00000560970 TRAV12-2A0A075B6T6 113 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 IGHV3OR16-12A0A075B7B8 117 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 TEX48A0A1B0GUV7 120 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 A0A1B0GV50 99 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 A0A1W2PPV4 95 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 TMEM189A5PLL7 270 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms