RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 LINC00467Q9BRT7 94 aa6.42□□□□□ -1.38
HERC1-210ENST00000560897 PBDC1Q9BVG4 233 aa6.42□□□□□ -1.38
HERC1-210ENST00000560897 ICOSQ9Y6W8 199 aa6.42□□□□□ -1.38
HERC1-210ENST00000560897 FXYD6-FXYD2A0A087WZ82 144 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 TRAV5A0A0B4J249 113 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 PGPEP1LA6NFU8 196 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 FAM24AA6NFZ4 105 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 ZFP92A6NM28 416 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 SNURFLB1AK76 121 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 SOCS3O14543 225 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 CRXO43186 299 aaPredicted RBP6.41□□□□□ -1.38
HERC1-210ENST00000560897 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 METTL15P1P0C7V9 234 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 RD3LP0DJH9 198 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 S100A7P31151 101 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 MEOX2P50222 304 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 CNN1P51911 297 aaKnown RBP6.41□□□□□ -1.38
HERC1-210ENST00000560897 RND2P52198 227 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 H2BFSP57053 126 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 AKR1C1Q04828 323 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 GAMTQ14353 236 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 MLANAQ16655 118 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 ATP6V1FQ16864 119 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 PRSS54Q6PEW0 395 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 SCXQ7RTU7 201 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 ZNF546Q86UE3 836 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 CCDC28AQ8IWP9 274 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 SCGB1C1Q8TD33 95 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 ACY3Q96HD9 319 aa6.41□□□□□ -1.38
HERC1-210ENST00000560897 A8MTW9 85 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 CST7O76096 145 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 TOMM40O96008 361 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 RPL12P30050 165 aaKnown RBP6.4□□□□□ -1.38
HERC1-210ENST00000560897 SULT1A1P50225 295 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 KRTAP10-4P60372 401 aaPredicted RBP6.4□□□□□ -1.38
HERC1-210ENST00000560897 ACOT6Q3I5F7 207 aaPredicted RBP6.4□□□□□ -1.38
HERC1-210ENST00000560897 S100A7AQ86SG5 101 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 OR51G1Q8NGK1 321 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 RNASE8Q8TDE3 154 aaKnown RBP6.4□□□□□ -1.38
HERC1-210ENST00000560897 TMPRSS5Q9H3S3 457 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 NPVFQ9HCQ7 196 aa6.4□□□□□ -1.38
HERC1-210ENST00000560897 LYRM2Q9NU23 88 aaPredicted RBP6.4□□□□□ -1.38
HERC1-210ENST00000560897 TNXBP22105 4242 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 LRCOL1A6NCL2 159 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 CRYGDP07320 174 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 RPL37AP61513 92 aaKnown RBP6.39□□□□□ -1.39
HERC1-210ENST00000560897 RHOBP62745 196 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 BAXQ07812 192 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 OR8I2Q8N0Y5 310 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 TMEM252Q8N6L7 170 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 LINC00612Q8N6U2 182 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 VSIG2Q96IQ7 327 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 GGACTQ9BVM4 153 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 UQCC1Q9NVA1 299 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 MBD2Q9UBB5 411 aa6.39□□□□□ -1.39
HERC1-210ENST00000560897 TRGV2A0A075B6R0 118 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 BORCS7-ASMTA0A0B4J1R7 106 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 C17orf112F2Z3M2 114 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 H7BYZ3 331 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 SLC38A11Q08AI6 406 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 IL15RAQ13261 267 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 C1orf194Q5T5A4 169 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 TMEM14EPQ6UXP3 125 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 SLC25A39Q9BZJ4 359 aaPredicted RBP6.38□□□□□ -1.39
HERC1-210ENST00000560897 OR5AC2Q9NZP5 309 aa6.38□□□□□ -1.39
HERC1-210ENST00000560897 ARPC5O15511 151 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 PAX4O43316 350 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 CFDP00746 253 aaPredicted RBP6.37□□□□□ -1.39
HERC1-210ENST00000560897 PSG1P11464 419 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 GALR1P47211 349 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 NHLH2Q02577 135 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 CD300CQ08708 224 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 BSXQ3C1V8 233 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 TEPPQ6URK8 271 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 LYPD5Q6UWN5 251 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 Q6ZRG5 221 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 ACOT7LQ6ZUV0 252 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 TMEM147Q9BVK8 224 aa6.37□□□□□ -1.39
HERC1-210ENST00000560897 KANTRA0A1W2PQU2 76 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 TAAR5O14804 337 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 MT1HL1P0DM35 61 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 LYZP61626 148 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 SELENOTP62341 195 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 EIF5AP63241 154 aaKnown RBP6.36□□□□□ -1.39
HERC1-210ENST00000560897 IFITM2Q01629 132 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 HIST1H1AQ02539 215 aaPredicted RBP6.36□□□□□ -1.39
HERC1-210ENST00000560897 ZNF266Q14584 549 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 ZFP69Q49AA0 526 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 WFDC10BQ8IUB3 73 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 TCTE3Q8IZS6 198 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 ZNF738Q8NE65 137 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 BPIFCQ8NFQ6 507 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 HYLS1Q96M11 299 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
HERC1-210ENST00000560897 SMIM3Q9BZL3 60 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms