RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 CITED1Q99966 193 aa12.49□□□□□ -0.41
PBX1-219ENST00000560641 TMEM160Q9NX00 188 aa12.49□□□□□ -0.41
PBX1-219ENST00000560641 H7C1H1 209 aa12.49□□□□□ -0.41
PBX1-219ENST00000560641 IL4P05112 153 aa12.49□□□□□ -0.41
PBX1-219ENST00000560641 CARD19Q96LW7 228 aa12.49□□□□□ -0.41
PBX1-219ENST00000560641 ASCL2Q99929 193 aa12.49□□□□□ -0.41
PBX1-219ENST00000560641 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
PBX1-219ENST00000560641 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
PBX1-219ENST00000560641 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
PBX1-219ENST00000560641 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 SRD5A1P18405 259 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 ZNF80P51504 273 aaPredicted RBP12.48□□□□□ -0.41
PBX1-219ENST00000560641 TMEM155Q4W5P6 130 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
PBX1-219ENST00000560641 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 K7EMI3 77 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 GAGE5Q13069 117 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 GAGE6Q13070 117 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 ASCL5Q7RTU5 278 aa12.48□□□□□ -0.41
PBX1-219ENST00000560641 TRBV20-1A0A075B6N2 111 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 RBP4P02753 201 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 RNF183Q96D59 192 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 IGHV3-21A0A0B4J1V1 117 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 M0R1B8 84 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 GAS8-AS1O95177 125 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 KAAG1Q9UBP8 84 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 MED13Q9UHV7 2174 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 DTX2Q86UW9 622 aa12.47□□□□□ -0.41
PBX1-219ENST00000560641 FRYLO94915 3013 aa12.46□□□□□ -0.41
PBX1-219ENST00000560641 LGALS1P09382 135 aaKnown RBP12.46□□□□□ -0.41
PBX1-219ENST00000560641 SPANXA1Q9NS26 97 aa12.46□□□□□ -0.41
PBX1-219ENST00000560641 HEATR1Q9H583 2144 aaKnown RBP12.46□□□□□ -0.41
PBX1-219ENST00000560641 IGHV1-8P0DP01 117 aa12.46□□□□□ -0.42
PBX1-219ENST00000560641 IGFL2Q6UWQ7 119 aa12.46□□□□□ -0.42
PBX1-219ENST00000560641 RBAKDNA6NC62 111 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 MSRB1Q9NZV6 116 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 IGLV1-47P01700 117 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 CD59P13987 128 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 PIP4P1Q86T03 277 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 IGFBPL1Q8WX77 278 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 CD7P09564 240 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 COX6B1P14854 86 aa12.45□□□□□ -0.42
PBX1-219ENST00000560641 AGRNO00468 2067 aa12.44□□□□□ -0.42
PBX1-219ENST00000560641 ZNF688P0C7X2 276 aa12.44□□□□□ -0.42
PBX1-219ENST00000560641 LOXP28300 417 aaPredicted RBP12.44□□□□□ -0.42
PBX1-219ENST00000560641 CNTFRP26992 372 aa12.44□□□□□ -0.42
PBX1-219ENST00000560641 RPL7P18124 248 aaKnown RBP12.43□□□□□ -0.42
PBX1-219ENST00000560641 Q6Q795 121 aa12.43□□□□□ -0.42
PBX1-219ENST00000560641 SEM1Q6ZVN7 128 aa12.43□□□□□ -0.42
PBX1-219ENST00000560641 NEXN-AS1Q8NBZ9 246 aa12.43□□□□□ -0.42
PBX1-219ENST00000560641 MAFAQ8NHW3 353 aaPredicted RBP12.43□□□□□ -0.42
PBX1-219ENST00000560641 IGKV2-40A0A087WW87 121 aaPredicted RBP12.43□□□□□ -0.42
PBX1-219ENST00000560641 IGKV2D-40P01614 121 aaPredicted RBP12.43□□□□□ -0.42
PBX1-219ENST00000560641 ASIPP42127 132 aa12.43□□□□□ -0.42
PBX1-219ENST00000560641 ZFAND6Q6FIF0 208 aa12.43□□□□□ -0.42
PBX1-219ENST00000560641 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
PBX1-219ENST00000560641 IGHV1-3A0A0C4DH29 117 aa12.42□□□□□ -0.42
PBX1-219ENST00000560641 TMEM178BH3BS89 294 aa12.42□□□□□ -0.42
PBX1-219ENST00000560641 NDUFB3O43676 98 aa12.42□□□□□ -0.42
PBX1-219ENST00000560641 ANAPC13Q9BS18 74 aa12.42□□□□□ -0.42
PBX1-219ENST00000560641 SDK1Q7Z5N4 2213 aa12.42□□□□□ -0.42
PBX1-219ENST00000560641 ENSAO43768 121 aaKnown RBP12.42□□□□□ -0.42
PBX1-219ENST00000560641 RHODO00212 210 aa12.41□□□□□ -0.42
PBX1-219ENST00000560641 NHLRC4P0CG21 123 aaPredicted RBP12.41□□□□□ -0.42
PBX1-219ENST00000560641 GATA3P23771 443 aa12.41□□□□□ -0.42
PBX1-219ENST00000560641 TMEM78Q5T7P6 136 aa12.41□□□□□ -0.42
PBX1-219ENST00000560641 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
PBX1-219ENST00000560641 CENPVL3A0A0U1RRI6 287 aa12.41□□□□□ -0.42
PBX1-219ENST00000560641 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
PBX1-219ENST00000560641 GLMPQ8WWB7 406 aa12.4□□□□□ -0.42
PBX1-219ENST00000560641 C17orf100A8MU93 164 aa12.4□□□□□ -0.42
PBX1-219ENST00000560641 ORMDL2Q53FV1 153 aa12.4□□□□□ -0.42
PBX1-219ENST00000560641 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 GATA1P15976 413 aaPredicted RBP12.39□□□□□ -0.43
PBX1-219ENST00000560641 ERCC8Q13216 396 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 TMEM95Q3KNT9 176 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 F8W735 103 aaPredicted RBP12.39□□□□□ -0.43
PBX1-219ENST00000560641 CTSZQ9UBR2 303 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 NBEAQ8NFP9 2946 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 NDUFA3O95167 84 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 NDUFA11Q86Y39 141 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 SMAD5-AS1Q9Y6J3 95 aa12.39□□□□□ -0.43
PBX1-219ENST00000560641 IGHV7-4-1A0A0J9YVY3 117 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 A8MWV9 139 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 BUB1B-PAK6H3BSN5 160 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 GFRALQ6UXV0 394 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 RAXQ9Y2V3 346 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 APELAP0DMC3 54 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 SMIM2Q9BVW6 85 aa12.38□□□□□ -0.43
PBX1-219ENST00000560641 IGLV11-55A0A075B6I3 123 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 IGHV3-72A0A0B4J1Y9 119 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 PSMB2P49721 201 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 SLC50A1Q9BRV3 221 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 ORM1P02763 201 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms