RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 PCNPQ8WW12 178 aaKnown RBP11.06□□□□□ -0.64
HERC1-207ENST00000560316 FAM19A4Q96LR4 140 aa11.06□□□□□ -0.64
HERC1-207ENST00000560316 Q9HAA7 133 aa11.06□□□□□ -0.64
HERC1-207ENST00000560316 CCDC59Q9P031 241 aaKnown RBP11.06□□□□□ -0.64
HERC1-207ENST00000560316 TRAV5A0A0B4J249 113 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 M0R3E3 92 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 RGS13O14921 159 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 AGPAT2O15120 278 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 SSSCA1O60232 199 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 SFT2D2O95562 160 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 OXTP01178 125 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 OR4E1P0C645 316 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 ID3Q02535 119 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 PPP1R1AQ13522 171 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 C4orf46Q504U0 113 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 ZNF546Q86UE3 836 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 ZNF479Q96JC4 524 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 MGAT4CQ9UBM8 478 aa11.05□□□□□ -0.64
HERC1-207ENST00000560316 GPX1P07203 203 aa11.04□□□□□ -0.64
HERC1-207ENST00000560316 PRR9Q5T870 116 aa11.04□□□□□ -0.64
HERC1-207ENST00000560316 C10orf113Q5VZT2 155 aa11.04□□□□□ -0.64
HERC1-207ENST00000560316 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
HERC1-207ENST00000560316 IGHV1OR15-1A0A075B7D0 117 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 IGHV3-38A0A0C4DH36 116 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 FNDC10F2Z333 226 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 KRTAP10-4P60372 401 aaPredicted RBP11.03□□□□□ -0.64
HERC1-207ENST00000560316 WFDC2Q14508 124 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 TMEM14EPQ6UXP3 125 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 OR10P1Q8NGE3 313 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 SMIM8Q96KF7 97 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 ARPC5LQ9BPX5 153 aa11.03□□□□□ -0.64
HERC1-207ENST00000560316 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 ORM1P02763 201 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 ARL16Q0P5N6 197 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 GUK1Q16774 197 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 IQCF2Q8IXL9 164 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 LINC00477Q96M19 166 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 MGST2Q99735 147 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 TXNDC17Q9BRA2 123 aa11.02□□□□□ -0.65
HERC1-207ENST00000560316 RABL2AQ9UBK7 228 aaPredicted RBP11.02□□□□□ -0.65
HERC1-207ENST00000560316 CRISP2P16562 243 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 LINC01556Q5JQF7 62 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 SCXQ7RTU7 201 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 ZFAND2AQ8N6M9 145 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 RAB2BQ8WUD1 216 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 BLNKQ8WV28 456 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 MRPL53Q96EL3 112 aaKnown RBP11.01□□□□□ -0.65
HERC1-207ENST00000560316 DNAJC4Q9NNZ3 241 aa11.01□□□□□ -0.65
HERC1-207ENST00000560316 SPCS2Q15005 226 aa11□□□□□ -0.65
HERC1-207ENST00000560316 LINC01620Q4KN68 170 aa11□□□□□ -0.65
HERC1-207ENST00000560316 OR10G4Q8NGN3 311 aa11□□□□□ -0.65
HERC1-207ENST00000560316 RSL24D1Q9UHA3 163 aaKnown RBP11□□□□□ -0.65
HERC1-207ENST00000560316 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
HERC1-207ENST00000560316 C9JCJ5 164 aa10.99□□□□□ -0.65
HERC1-207ENST00000560316 ZNF253O75346 499 aa10.99□□□□□ -0.65
HERC1-207ENST00000560316 MCFD2Q8NI22 146 aa10.99□□□□□ -0.65
HERC1-207ENST00000560316 SOSTQ9BQB4 213 aa10.99□□□□□ -0.65
HERC1-207ENST00000560316 SLC25A31Q9H0C2 315 aa10.99□□□□□ -0.65
HERC1-207ENST00000560316 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.98□□□□□ -0.65
HERC1-207ENST00000560316 IGKV2-40A0A087WW87 121 aaPredicted RBP10.98□□□□□ -0.65
HERC1-207ENST00000560316 LECT2O14960 151 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 NDUFB4O95168 129 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 IGKV2D-40P01614 121 aaPredicted RBP10.98□□□□□ -0.65
HERC1-207ENST00000560316 IGHV3-30P01768 117 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 IGHV3-33P01772 117 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 IGHV3-30-3P0DP02 117 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 IGHV3-30-5P0DP03 117 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 FAUP35544 74 aaKnown RBP10.98□□□□□ -0.65
HERC1-207ENST00000560316 PPT1P50897 306 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 MIC13Q5XKP0 118 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 C9orf47Q6ZRZ4 202 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 EXOC3-AS1Q8N2X6 119 aa10.98□□□□□ -0.65
HERC1-207ENST00000560316 SCGB1D2O95969 90 aa10.97□□□□□ -0.65
HERC1-207ENST00000560316 NMBP08949 121 aa10.97□□□□□ -0.65
HERC1-207ENST00000560316 Q6ZRG5 221 aa10.97□□□□□ -0.65
HERC1-207ENST00000560316 NHLRC2Q8NBF2 726 aa10.97□□□□□ -0.65
HERC1-207ENST00000560316 SRRQ9GZT4 340 aa10.97□□□□□ -0.65
HERC1-207ENST00000560316 PKHD1L1Q86WI1 4243 aa10.97□□□□□ -0.65
HERC1-207ENST00000560316 CAMLGP49069 296 aa10.96□□□□□ -0.65
HERC1-207ENST00000560316 TMEM78Q5T7P6 136 aa10.96□□□□□ -0.65
HERC1-207ENST00000560316 RASL10AQ92737 203 aa10.96□□□□□ -0.65
HERC1-207ENST00000560316 SLC25A21Q9BQT8 299 aaPredicted RBP10.96□□□□□ -0.65
HERC1-207ENST00000560316 PRELID1Q9Y255 219 aa10.96□□□□□ -0.65
HERC1-207ENST00000560316 TIMM9Q9Y5J7 89 aa10.96□□□□□ -0.65
HERC1-207ENST00000560316 TRAV8-6A0A0B4J262 113 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 FABP12A6NFH5 140 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 TSC22D2O75157 780 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 TIRAPP58753 221 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 OR10J3Q5JRS4 329 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 NRARPQ7Z6K4 114 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 TOMM5Q8N4H5 51 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 OR1L4Q8NGR5 311 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 TRIM63Q969Q1 353 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 GGACTQ9BVM4 153 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 ZNF492Q9P255 531 aa10.95□□□□□ -0.66
HERC1-207ENST00000560316 TRAV4A0A0B4J268 109 aa10.94□□□□□ -0.66
HERC1-207ENST00000560316 C9orf170A2RU37 121 aa10.94□□□□□ -0.66
HERC1-207ENST00000560316 PYYP10082 97 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms