RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HIST1H1AQ02539 215 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 OPCMLQ14982 345 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 Q5BKY6 102 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 MIC13Q5XKP0 118 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 ZNF738Q8NE65 137 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 TMEM37Q8WXS4 190 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 UQCC1Q9NVA1 299 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 MBD2Q9UBB5 411 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 PLA2G2DQ9UNK4 145 aa8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 E5RGE8 158 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 G3V3Q6 166 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 H7BYZ3 331 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 RLN2P04090 185 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 PRB4P10163 310 aaPredicted RBP8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 SELENOTP62341 195 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 ZNF546Q86UE3 836 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 OR5C1Q8NGR4 320 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 ARL6Q9H0F7 186 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 FAM30AQ9NZY2 134 aa8.67□□□□□ -1.02
RABGGTA-213ENST00000560127 HYPMO75409 117 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 S100A11P31949 105 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 CDKN1BP46527 198 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 CAMLGP49069 296 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 CYCSP99999 105 aaKnown RBP8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 FGL1Q08830 312 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 KIR3DS1Q14943 382 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 RGS21Q2M5E4 152 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 STX12Q86Y82 276 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 DEFB104AQ8WTQ1 72 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 CHAC2Q8WUX2 184 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 ARV1Q9H2C2 271 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 WFDC1Q9HC57 220 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 PPP1R14DQ9NXH3 145 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 HIGD1AQ9Y241 93 aa8.66□□□□□ -1.02
RABGGTA-213ENST00000560127 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 OR5G3P0C626 314 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 FGF7P21781 194 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 Q6ZTI0 123 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 THAP6Q8TBB0 222 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 HSPB11Q9Y547 144 aa8.65□□□□□ -1.02
RABGGTA-213ENST00000560127 TRAV5A0A0B4J249 113 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 HBG1P69891 147 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 HBG2P69892 147 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 LRP2P98164 4655 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 BAXQ07812 192 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 GPR82Q96P67 336 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 NPCDR1Q9BY65 106 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 SLC39A9Q9NUM3 307 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 MSRB1Q9NZV6 116 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 PXMP4Q9Y6I8 212 aa8.64□□□□□ -1.03
RABGGTA-213ENST00000560127 A0A087X0K7 114 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 SNURFLB1AK76 121 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 SLC17A3O00476 420 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 SNRPCP09234 159 aaKnown RBP8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 RPL12P30050 165 aaKnown RBP8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 RPL29P47914 159 aaKnown RBP8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 CCDC28AQ8IWP9 274 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 C20orf144Q9BQM9 153 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 PARD6GQ9BYG4 376 aaPredicted RBP8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 WDR61Q9GZS3 305 aaKnown RBP8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 SLC25A31Q9H0C2 315 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 MED28Q9H204 178 aa8.63□□□□□ -1.03
RABGGTA-213ENST00000560127 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 H3BQ15 152 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 GIPP09681 153 aaPredicted RBP8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 IGLC2P0DOY2 106 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 RAP2BP61225 183 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 PSG3Q16557 428 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 PXDC1Q5TGL8 231 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 GFI1BQ5VTD9 330 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 ATP5SQ99766 215 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
RABGGTA-213ENST00000560127 TRAV9-2A0A087WT02 112 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 RNF222A6NCQ9 220 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 H3BTX0 84 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 COX7A2P2O60397 106 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 DAZ2Q13117 558 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 C10orf113Q5VZT2 155 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 NTN5Q8WTR8 489 aaPredicted RBP8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 RPUSD4Q96CM3 377 aaKnown RBP8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 FAM167A-AS1Q96KT0 104 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 LINC00467Q9BRT7 94 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 ICOSQ9Y6W8 199 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 LY96Q9Y6Y9 160 aa8.61□□□□□ -1.03
RABGGTA-213ENST00000560127 TRGV2A0A075B6R0 118 aa8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 MPDU1O75352 247 aa8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 ZNF324O75467 553 aaPredicted RBP8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 PET100P0DJ07 73 aa8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 RPL7P18124 248 aaKnown RBP8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 AQP10Q96PS8 301 aa8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 DNAJC4Q9NNZ3 241 aa8.6□□□□□ -1.03
RABGGTA-213ENST00000560127 TNXBP22105 4242 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms