RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.87□□□□□ -0.99
TM2D3-208ENST00000559891 A0A0G2JLM5 398 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 PMCHP20382 165 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
TM2D3-208ENST00000559891 ETFRF1Q6IPR1 90 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 NIT1Q86X76 327 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 DNAJC4Q9NNZ3 241 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 GOLT1BQ9Y3E0 138 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 TRBV7-1A0A0A6YYK4 115 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 LGALS1P09382 135 aaKnown RBP8.87□□□□□ -0.99
TM2D3-208ENST00000559891 ARL3P36405 182 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 UNQ9165/PRO28630Q6UXU0 137 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 THAP8Q8NA92 274 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 OR11H1Q8NG94 326 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 RAX2Q96IS3 184 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 CITED1Q99966 193 aa8.87□□□□□ -0.99
TM2D3-208ENST00000559891 ZNF331Q9NQX6 463 aaPredicted RBP8.87□□□□□ -0.99
TM2D3-208ENST00000559891 PEF1Q9UBV8 284 aaKnown RBP8.87□□□□□ -0.99
TM2D3-208ENST00000559891 LINC00614P0C842 121 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 C3orf79P0CE67 100 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 PSG1P11464 419 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 BTF3P20290 206 aaKnown RBP8.86□□□□□ -0.99
TM2D3-208ENST00000559891 SLURP1P55000 103 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 COL5A1-AS1Q5SY13 56 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 MORN5Q5VZ52 161 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 PPP1R14DQ9NXH3 145 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 UQCR10Q9UDW1 63 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 TSSC4Q9Y5U2 329 aaPredicted RBP8.86□□□□□ -0.99
TM2D3-208ENST00000559891 TRAV5A0A0B4J249 113 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 ZNF207O43670 478 aaKnown RBP8.86□□□□□ -0.99
TM2D3-208ENST00000559891 SLAQ13239 276 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 OR1L4Q8NGR5 311 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 C18orf32Q8TCD1 76 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 C4orf3Q8WVX3 66 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 TMEM158Q8WZ71 300 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 GRAMD2BQ96HH9 432 aa8.86□□□□□ -0.99
TM2D3-208ENST00000559891 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
TM2D3-208ENST00000559891 NPSP0C0P6 89 aa8.85□□□□□ -0.99
TM2D3-208ENST00000559891 IGLC2P0DOY2 106 aa8.85□□□□□ -0.99
TM2D3-208ENST00000559891 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
TM2D3-208ENST00000559891 FCGR2BP31994 310 aaPredicted RBP8.85□□□□□ -0.99
TM2D3-208ENST00000559891 PEX7O00628 323 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 COX7A2P2O60397 106 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 KLF5Q13887 457 aaPredicted RBP8.84□□□□□ -0.99
TM2D3-208ENST00000559891 BATFQ16520 125 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 C10orf113Q5VZT2 155 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 NHLRC2Q8NBF2 726 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 LINC00479Q96M42 142 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 PAXXQ9BUH6 204 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 IGHV3-49A0A0A0MS15 119 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 HYPMO75409 117 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 HOXD3P31249 432 aaPredicted RBP8.84□□□□□ -0.99
TM2D3-208ENST00000559891 NUP35Q8NFH5 326 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 OR1N2Q8NGR9 330 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 BORCS7Q96B45 105 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 TRGV9Q99603 122 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 TXN2Q99757 166 aa8.84□□□□□ -0.99
TM2D3-208ENST00000559891 DNHD1Q96M86 4753 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 APOHP02749 345 aaPredicted RBP8.83□□□□□ -1
TM2D3-208ENST00000559891 IL4P05112 153 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 PYYP10082 97 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 MYCNOSP40205 109 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 SYNJ2BPP57105 145 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 PMCHL1Q16048 86 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 PATE2Q6UY27 113 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 FAM19A2Q8N3H0 131 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 NUDT10Q8NFP7 164 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
TM2D3-208ENST00000559891 FXYD5Q96DB9 178 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 NUDT11Q96G61 164 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 ZFAND3Q9H8U3 227 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 ZFP30Q9Y2G7 519 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 IGHV3-66A0A0C4DH42 116 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 CCL24O00175 119 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 ORM2P19652 201 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 TM4SF20Q53R12 229 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 ATP5L2Q7Z4Y8 100 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 C3orf56Q8N813 242 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 SMIM12Q96EX1 92 aa8.83□□□□□ -1
TM2D3-208ENST00000559891 NOTCH3Q9UM47 2321 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 TOMM40O96008 361 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 HIST1H1EP10412 219 aaKnown RBP8.82□□□□□ -1
TM2D3-208ENST00000559891 LYZP61626 148 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 LEMD1Q68G75 181 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 C12orf54Q6X4T0 127 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 Q6ZN92 141 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 NDUFA11Q86Y39 141 aa8.82□□□□□ -1
TM2D3-208ENST00000559891 LINC01619G3V211 115 aa8.81□□□□□ -1
TM2D3-208ENST00000559891 NTF3P20783 257 aa8.81□□□□□ -1
TM2D3-208ENST00000559891 HNRNPA3P51991 378 aaKnown RBP8.81□□□□□ -1
TM2D3-208ENST00000559891 FHL3Q13643 280 aa8.81□□□□□ -1
TM2D3-208ENST00000559891 STXBP6Q8NFX7 210 aa8.81□□□□□ -1
TM2D3-208ENST00000559891 OR1B1Q8NGR6 318 aa8.81□□□□□ -1
TM2D3-208ENST00000559891 ALKBH7Q9BT30 221 aaPredicted RBP8.81□□□□□ -1
TM2D3-208ENST00000559891 ZNF747Q9BV97 191 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms