RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 IGLV2-8P01709 118 aa9.09□□□□□ -0.95
HERC1-205ENST00000559886 RPL23P62829 140 aaKnown RBP9.09□□□□□ -0.95
HERC1-205ENST00000559886 ERCC8Q13216 396 aa9.09□□□□□ -0.95
HERC1-205ENST00000559886 PRNTQ86SH4 94 aa9.09□□□□□ -0.95
HERC1-205ENST00000559886 LINC01551Q86U37 167 aa9.09□□□□□ -0.95
HERC1-205ENST00000559886 OR8A1Q8NGG7 326 aa9.09□□□□□ -0.95
HERC1-205ENST00000559886 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
HERC1-205ENST00000559886 OR10J6PQ8NGY7 276 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 ZFP30Q9Y2G7 519 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 NPIPB6E9PJ23 425 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 F6UB75 175 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 SNAPINO95295 136 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 ZNF705DP0CH99 300 aaPredicted RBP9.08□□□□□ -0.96
HERC1-205ENST00000559886 ZNF705BP0CI00 300 aaPredicted RBP9.08□□□□□ -0.96
HERC1-205ENST00000559886 CLRN3Q8NCR9 226 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 MAP6D1Q9H9H5 199 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 AURKAIP1Q9NWT8 199 aaPredicted RBP9.08□□□□□ -0.96
HERC1-205ENST00000559886 PPP1R14DQ9NXH3 145 aa9.08□□□□□ -0.96
HERC1-205ENST00000559886 ANK2Q01484 3957 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 K7EN84 100 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 DEFB131AP59861 70 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 ADIRFQ15847 76 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 BEAN1Q3B7T3 259 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 TMEM78Q5T7P6 136 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 TMEM183AQ8IXX5 376 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 LINC00477Q96M19 166 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 M0R036 132 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 WIPF1O43516 503 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 ZNF138P52744 262 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 GDF5OSQ5U4N7 250 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 NHLRC2Q8NBF2 726 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 Q8TAT8 98 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 PRR25Q96S07 402 aa9.07□□□□□ -0.96
HERC1-205ENST00000559886 A0A0J9YX75 114 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 IGLL1P15814 213 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 HIST1H1AQ02539 215 aaPredicted RBP9.06□□□□□ -0.96
HERC1-205ENST00000559886 ODF3L2Q3SX64 289 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 SAPCD1Q5SSQ6 148 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 ASCL2Q99929 193 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 SAV1Q9H4B6 383 aaPredicted RBP9.06□□□□□ -0.96
HERC1-205ENST00000559886 ZNF492Q9P255 531 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 GCGP01275 180 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 EBLN2Q6P2I7 272 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 ISOC2Q96AB3 205 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 GPR61Q9BZJ8 451 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 CMYA5Q8N3K9 4069 aa9.06□□□□□ -0.96
HERC1-205ENST00000559886 B4DEV8 164 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 CMC4P56277 68 aaPredicted RBP9.05□□□□□ -0.96
HERC1-205ENST00000559886 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 FAM110AQ9BQ89 295 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 LENEPQ9Y5L5 61 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 C7orf77A4D0Y5 90 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 MGST1P10620 155 aaKnown RBP9.05□□□□□ -0.96
HERC1-205ENST00000559886 OR5I1Q13606 314 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 RHEBQ15382 184 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
HERC1-205ENST00000559886 OR11H12B2RN74 326 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 RIPPLY3P57055 190 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 C8orf49Q96NF6 230 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 TRBV7-9A0A0J9YWB2 115 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 DUSP14O95147 198 aaKnown RBP9.04□□□□□ -0.96
HERC1-205ENST00000559886 CD7P09564 240 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 HLA-DRB4P13762 266 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 ZNF124Q15973 351 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 PRR31Q5SQ13 230 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 APRG1Q8IVJ8 170 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 ZC2HC1AQ96GY0 325 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 BIN3Q9NQY0 253 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 HLA-DRB4X5D2U9 266 aa9.04□□□□□ -0.96
HERC1-205ENST00000559886 KNCNA6PVL3 124 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 C19orf73Q9NVV2 129 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 PKD1L1Q8TDX9 2849 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 A8MTW9 85 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 H3BMM0 161 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
HERC1-205ENST00000559886 A0A087WWC5 75 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 MT-ND4LP03901 98 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 RNF212Q495C1 297 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 SMUG1Q53HV7 270 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 LINC00322Q6ZN03 302 aaPredicted RBP9.02□□□□□ -0.97
HERC1-205ENST00000559886 OR4B1Q8NGF8 309 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 RPS10P5Q9NQ39 176 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 CRISP2P16562 243 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 CRIP1P50238 77 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 ZFAND2AQ8N6M9 145 aa9.02□□□□□ -0.97
HERC1-205ENST00000559886 RNASE7Q9H1E1 156 aaKnown RBP9.02□□□□□ -0.97
HERC1-205ENST00000559886 ERVFC1-1P60608 527 aa9.01□□□□□ -0.97
HERC1-205ENST00000559886 IBA57Q5T440 356 aaKnown RBP9.01□□□□□ -0.97
HERC1-205ENST00000559886 AMTNQ6UX39 209 aa9.01□□□□□ -0.97
HERC1-205ENST00000559886 FAM231DQ6ZW35 169 aa9.01□□□□□ -0.97
HERC1-205ENST00000559886 ANAPC16Q96DE5 110 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms