RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ZNF727A8MUV8 499 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 NPIPB6E9PJ23 425 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 NDUFS6O75380 124 aaKnown RBP7.74□□□□□ -1.17
TPM1-221ENST00000559831 FLI1Q01543 452 aaPredicted RBP7.74□□□□□ -1.17
TPM1-221ENST00000559831 TMEM183BQ1AE95 376 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 SOHLH1Q5JUK2 328 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 Q86TA4 180 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 SMIM7Q9BQ49 75 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 PPP1R14DQ9NXH3 145 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 ANK2Q01484 3957 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 TMEM218A2RU14 115 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 F8W036 122 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 DUSP14O95147 198 aaKnown RBP7.73□□□□□ -1.17
TPM1-221ENST00000559831 IGLV2-11P01706 119 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 S100A9P06702 114 aaKnown RBP7.73□□□□□ -1.17
TPM1-221ENST00000559831 HLA-DRB4P13762 266 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 GNG4P50150 75 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 EGFEM1PQ0D2K5 195 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 CENPWQ5EE01 88 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 C9orf47Q6ZRZ4 202 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 STHQ8IWL8 128 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 DEFB125Q8N687 156 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 NHLRC2Q8NBF2 726 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 C19orf73Q9NVV2 129 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 ZMAT5Q9UDW3 170 aaKnown RBP7.73□□□□□ -1.17
TPM1-221ENST00000559831 HLA-DRB4X5D2U9 266 aa7.73□□□□□ -1.17
TPM1-221ENST00000559831 FBLL1A6NHQ2 334 aaKnown RBP7.72□□□□□ -1.17
TPM1-221ENST00000559831 H3BMM0 161 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 J3KRW8 73 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 CT45A10P0DMU9 189 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
TPM1-221ENST00000559831 ZNF138P52744 262 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 TAS2R60P59551 318 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 BAGE2Q86Y30 109 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 IGF2BP2-AS1Q96M15 143 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 LINC00477Q96M19 166 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 FAM110AQ9BQ89 295 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 NDFIP1Q9BT67 221 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 SRD5A3Q9H8P0 318 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 ZNF492Q9P255 531 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 KLF12Q9Y4X4 402 aa7.72□□□□□ -1.17
TPM1-221ENST00000559831 PGPEP1LA6NFU8 196 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 LTAP01374 205 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 MGST1P10620 155 aaKnown RBP7.71□□□□□ -1.18
TPM1-221ENST00000559831 ADCYAP1P18509 176 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 FXYD7P58549 80 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 FAM74A3Q4VXF1 159 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 Q8N1Y9 231 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 C8orf49Q96NF6 230 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 AURKAIP1Q9NWT8 199 aaPredicted RBP7.71□□□□□ -1.18
TPM1-221ENST00000559831 CMYA5Q8N3K9 4069 aa7.71□□□□□ -1.18
TPM1-221ENST00000559831 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 TRBV6-1A0A0K0K1D8 114 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 RBMY1BA6NDE4 496 aaKnown RBP7.7□□□□□ -1.18
TPM1-221ENST00000559831 RBMY1EA6NEQ0 496 aaKnown RBP7.7□□□□□ -1.18
TPM1-221ENST00000559831 C9JCJ5 164 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 RBMY1DP0C7P1 496 aaKnown RBP7.7□□□□□ -1.18
TPM1-221ENST00000559831 LEPP41159 167 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 TMEM241Q24JQ0 296 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 TRPT1Q86TN4 253 aaKnown RBP7.7□□□□□ -1.18
TPM1-221ENST00000559831 TVP23CQ96ET8 276 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 NIPSNAP3BQ9BS92 247 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 TUBA4BQ9H853 241 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 NAT8Q9UHE5 227 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
TPM1-221ENST00000559831 M0R2Z0 102 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 IGLV2-8P01709 118 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 PRB2P02812 416 aaPredicted RBP7.69□□□□□ -1.18
TPM1-221ENST00000559831 ADIRFQ15847 76 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 SPINK13Q1W4C9 94 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 SAPCD1Q5SSQ6 148 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 PRR27Q6MZM9 219 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 AMTNQ6UX39 209 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 TMEM183AQ8IXX5 376 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 OCC1Q8TAD7 63 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 SEC11CQ9BY50 192 aa7.69□□□□□ -1.18
TPM1-221ENST00000559831 TRAV12-2A0A075B6T6 113 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 A8MTW9 85 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 KRBOX1C9JBD0 128 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 GPX1P07203 203 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 TSPOP30536 169 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 RNASE4P34096 147 aaKnown RBP7.68□□□□□ -1.18
TPM1-221ENST00000559831 OR5I1Q13606 314 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 KIR3DS1Q14943 382 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 SMUG1Q53HV7 270 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 PRR9Q5T870 116 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 ZC2HC1AQ96GY0 325 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 FAM19A4Q96LR4 140 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 ODF3Q96PU9 254 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 SDF2L1Q9HCN8 221 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 LENEPQ9Y5L5 61 aa7.68□□□□□ -1.18
TPM1-221ENST00000559831 LOC102724200A0A096LPH7 203 aaPredicted RBP7.67□□□□□ -1.18
TPM1-221ENST00000559831 K7EN84 100 aa7.67□□□□□ -1.18
TPM1-221ENST00000559831 M0R036 132 aa7.67□□□□□ -1.18
TPM1-221ENST00000559831 ATP6V1G1O75348 118 aa7.67□□□□□ -1.18
TPM1-221ENST00000559831 GCGP01275 180 aa7.67□□□□□ -1.18
TPM1-221ENST00000559831 APOC3P02656 99 aa7.67□□□□□ -1.18
TPM1-221ENST00000559831 IGHV4-30-4P0DP06 118 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms