RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SACSQ9NZJ4 4579 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 PLAC8L1A1L4L8 177 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 MAP1LC3B2A6NCE7 125 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 PGPA6NDG6 321 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 KLLNB2CW77 178 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 TPT1P13693 172 aaKnown RBP8.22□□□□□ -1.09
SNX1-204ENST00000559061 NUTF2P61970 127 aaKnown RBP8.22□□□□□ -1.09
SNX1-204ENST00000559061 OR10J6PQ8NGY7 276 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 MBD3L1Q8WWY6 194 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 TVP23CQ96ET8 276 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 NEU1Q99519 415 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 MAP1LC3BQ9GZQ8 125 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 AAMDCQ9H7C9 122 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 CELA1Q9UNI1 258 aa8.22□□□□□ -1.09
SNX1-204ENST00000559061 DNAH1Q9P2D7 4330 aa8.21□□□□□ -1.09
SNX1-204ENST00000559061 TRAV8-1A0A0A6YYK1 113 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 IGLV2-11P01706 119 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 CRISP2P16562 243 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 CDKN1BP46527 198 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 IL17DQ8TAD2 202 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 MUC7Q8TAX7 377 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 ZNF492Q9P255 531 aa8.21□□□□□ -1.1
SNX1-204ENST00000559061 IGHV3OR16-12A0A075B7B8 117 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 RBAKDNA6NC62 111 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 FAM74A7A6NL05 159 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 INSP01308 110 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 MIFP14174 115 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 AZU1P20160 251 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 CCL20P78556 96 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 BTN1A1Q13410 526 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 FAM74A1Q5RGS3 127 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 SLC51BQ86UW2 128 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 TMEM167BQ9NRX6 74 aa8.2□□□□□ -1.1
SNX1-204ENST00000559061 LYSTQ99698 3801 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 A0A1W2PRE2 83 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 ZNF705GA8MUZ8 300 aaPredicted RBP8.19□□□□□ -1.1
SNX1-204ENST00000559061 UMAD1C9J7I0 102 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 J3KRW8 73 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 ZNF324O75467 553 aaPredicted RBP8.19□□□□□ -1.1
SNX1-204ENST00000559061 AMBPP02760 352 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 TCRAP04437 139 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 SLC25A5P05141 298 aaKnown RBP8.19□□□□□ -1.1
SNX1-204ENST00000559061 SULT1A2P50226 295 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 UBE2G2P60604 165 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 ZFAND6Q6FIF0 208 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 GOLT1AQ6ZVE7 132 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 LINC00477Q96M19 166 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 PPP1R14DQ9NXH3 145 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 RPH3ALQ9UNE2 315 aa8.19□□□□□ -1.1
SNX1-204ENST00000559061 ALMS1Q8TCU4 4167 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 A0A1B0GV50 99 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 LEPP41159 167 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 ATP5G3P48201 142 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 ZNF138P52744 262 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 NANOS2P60321 138 aaKnown RBP8.18□□□□□ -1.1
SNX1-204ENST00000559061 SUMO1P63165 101 aaKnown RBP8.18□□□□□ -1.1
SNX1-204ENST00000559061 EIF5AP63241 154 aaKnown RBP8.18□□□□□ -1.1
SNX1-204ENST00000559061 CASC10Q5T4H9 136 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 DPPA3Q6W0C5 159 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 ARL6IP6Q8N6S5 226 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 C5orf17Q8NAS9 161 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 SGK494Q96LW2 274 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 LINC00479Q96M42 142 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 GOLT1BQ9Y3E0 138 aa8.18□□□□□ -1.1
SNX1-204ENST00000559061 TRAV12-3A0A0B4J271 114 aa8.17□□□□□ -1.1
SNX1-204ENST00000559061 C7orf71A4D174 169 aa8.17□□□□□ -1.1
SNX1-204ENST00000559061 IQCF2Q8IXL9 164 aa8.17□□□□□ -1.1
SNX1-204ENST00000559061 RNASE8Q8TDE3 154 aaKnown RBP8.17□□□□□ -1.1
SNX1-204ENST00000559061 RXFP4Q8TDU9 374 aa8.17□□□□□ -1.1
SNX1-204ENST00000559061 SFT2D1Q8WV19 159 aa8.17□□□□□ -1.1
SNX1-204ENST00000559061 EPDR1Q9UM22 224 aa8.17□□□□□ -1.1
SNX1-204ENST00000559061 TRAV1-1A0A0B4J248 108 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 TRBV7-9A0A0J9YWB2 115 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 LOC102723971A0A1B0GUV8 181 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 SMIM9A6NGZ8 99 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 CSN1S1P47710 185 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 C12orf74Q32Q52 190 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 TMEM78Q5T7P6 136 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 ZNF767PQ75MW2 155 aa8.16□□□□□ -1.1
SNX1-204ENST00000559061 RYR2Q92736 4967 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 RYR3Q15413 4870 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 TRAV34A0A0B4J273 112 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 F6UZH7 168 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 C3orf84H3BNL1 204 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 PAGE4O60829 102 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 NMBP08949 121 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 H2AFB1P0C5Y9 115 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 TSPOP30536 169 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 RNASE4P34096 147 aaKnown RBP8.15□□□□□ -1.1
SNX1-204ENST00000559061 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.1
SNX1-204ENST00000559061 TAS2R60P59551 318 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 ALKAL2Q6UX46 152 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 C11orf72Q8NBR9 251 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 LINC01587Q99440 93 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms