RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 FAM78BQ5VT40 261 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 EBLN2Q6P2I7 272 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 MORN3Q6PF18 240 aaPredicted RBP7.01□□□□□ -1.29
SPG11-214ENST00000558989 Q6ZRG5 221 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 GATAD1Q8WUU5 269 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 ISOC2Q96AB3 205 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 SLC35B3Q9H1N7 401 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 RPRMQ9NS64 109 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 HLA-DRB4X5D2U9 266 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 TRAV8-2A0A0B4J237 113 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 ISLRO14498 428 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 PET100P0DJ07 73 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 NANOS2P60321 138 aaKnown RBP7.01□□□□□ -1.29
SPG11-214ENST00000558989 CYCSP99999 105 aaKnown RBP7.01□□□□□ -1.29
SPG11-214ENST00000558989 OPCMLQ14982 345 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 SLC51BQ86UW2 128 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 ZNF738Q8NE65 137 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 SLC25A31Q9H0C2 315 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 PXMP4Q9Y6I8 212 aa7.01□□□□□ -1.29
SPG11-214ENST00000558989 IGHV4-28A0A0C4DH34 117 aa7□□□□□ -1.29
SPG11-214ENST00000558989 SNAPINO95295 136 aa7□□□□□ -1.29
SPG11-214ENST00000558989 MPC2O95563 127 aa7□□□□□ -1.29
SPG11-214ENST00000558989 TSPAN13O95857 204 aa7□□□□□ -1.29
SPG11-214ENST00000558989 CXCL3P19876 107 aa7□□□□□ -1.29
SPG11-214ENST00000558989 MEOX2P50222 304 aa7□□□□□ -1.29
SPG11-214ENST00000558989 NUTF2P61970 127 aaKnown RBP7□□□□□ -1.29
SPG11-214ENST00000558989 GCSAMLQ5JQS6 135 aa7□□□□□ -1.29
SPG11-214ENST00000558989 FOXI2Q6ZQN5 318 aa7□□□□□ -1.29
SPG11-214ENST00000558989 OR11H4Q8NGC9 324 aa7□□□□□ -1.29
SPG11-214ENST00000558989 GPR82Q96P67 336 aa7□□□□□ -1.29
SPG11-214ENST00000558989 SLC39A9Q9NUM3 307 aa7□□□□□ -1.29
SPG11-214ENST00000558989 A0A0J9YX75 114 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 TMEM238C9JI98 176 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 PTTG1O95997 202 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 M6PRP20645 277 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 NKX2-5P52952 324 aaPredicted RBP6.99□□□□□ -1.29
SPG11-214ENST00000558989 EMP1P54849 157 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 FCN2Q15485 313 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 ATP6V1FQ16864 119 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 ZNF767PQ75MW2 155 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 RNF126Q9BV68 326 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 V9GYY9 64 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 ZNF705FA8MVS1 300 aaPredicted RBP6.99□□□□□ -1.29
SPG11-214ENST00000558989 SLC17A3O00476 420 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 HIST1H1AQ02539 215 aaPredicted RBP6.99□□□□□ -1.29
SPG11-214ENST00000558989 S100A7AQ86SG5 101 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 BPIFA4PQ86YQ2 179 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 CSNK1G2-AS1Q8NCQ2 148 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 C11orf45Q8TAV5 145 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 TM2D2Q9BX73 214 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 NPCDR1Q9BY65 106 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 MED28Q9H204 178 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 OR51M1Q9H341 326 aa6.99□□□□□ -1.29
SPG11-214ENST00000558989 DYNC2H1Q8NCM8 4307 aaKnown RBP6.98□□□□□ -1.29
SPG11-214ENST00000558989 M0R2Z0 102 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
SPG11-214ENST00000558989 RBMY1A1P0DJD3 496 aaKnown RBP6.98□□□□□ -1.29
SPG11-214ENST00000558989 RBMY1CP0DJD4 496 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 RPL12P30050 165 aaKnown RBP6.98□□□□□ -1.29
SPG11-214ENST00000558989 RPL29P47914 159 aaKnown RBP6.98□□□□□ -1.29
SPG11-214ENST00000558989 RHOBP62745 196 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 PSG9Q00887 426 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 RBMY1FQ15415 496 aaKnown RBP6.98□□□□□ -1.29
SPG11-214ENST00000558989 SPINK13Q1W4C9 94 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 PXDC1Q5TGL8 231 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 SPATA31B1PQ5VZV4 182 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 Q8NAQ8 132 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 C1QTNF4Q9BXJ3 329 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 AAMDCQ9H7C9 122 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 RFNGQ9Y644 331 aa6.98□□□□□ -1.29
SPG11-214ENST00000558989 TRAV12-2A0A075B6T6 113 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 H3BQ15 152 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 EIF3GO75821 320 aaKnown RBP eCLIP6.97□□□□□ -1.29
SPG11-214ENST00000558989 IFNA5P01569 189 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 PYYP10082 97 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 ZNF709Q8N972 641 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 OR11H7Q8NGC8 314 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 BLNKQ8WV28 456 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 PFDN5Q99471 154 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 HSPB11Q9Y547 144 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 PLECQ15149 4684 aaKnown RBP6.97□□□□□ -1.29
SPG11-214ENST00000558989 FAM74A7A6NL05 159 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 RHODO00212 210 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 PRM2P04554 102 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 SRSF3P84103 164 aaKnown RBP6.97□□□□□ -1.29
SPG11-214ENST00000558989 FAM74A3Q4VXF1 159 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 SAMD13Q5VXD3 122 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 BAP18Q8IXM2 172 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 PHLDA1Q8WV24 401 aaPredicted RBP6.97□□□□□ -1.29
SPG11-214ENST00000558989 RPUSD4Q96CM3 377 aaKnown RBP6.97□□□□□ -1.29
SPG11-214ENST00000558989 ATP5SQ99766 215 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 TMEM208Q9BTX3 173 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 WDR61Q9GZS3 305 aaKnown RBP6.97□□□□□ -1.29
SPG11-214ENST00000558989 CELA1Q9UNI1 258 aa6.97□□□□□ -1.29
SPG11-214ENST00000558989 RYR2Q92736 4967 aa6.96□□□□□ -1.29
SPG11-214ENST00000558989 LCE6AA0A183 80 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 ZNF705EA8MWA4 302 aaPredicted RBP6.96□□□□□ -1.3
SPG11-214ENST00000558989 PRAC2D3DTV9 90 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 MIFP14174 115 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms