RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 WDR61Q9GZS3 305 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF586Q9NXT0 402 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 KLK5Q9Y337 293 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 HSPB11Q9Y547 144 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 BOLA2-SMG1P6H3BVE0 249 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 C12orf74Q32Q52 190 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF767PQ75MW2 155 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 BAP18Q8IXM2 172 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 Q8N1X5 172 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 ATP5SQ99766 215 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 GOLT1BQ9Y3E0 138 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 TRBV19A0A075B6N1 114 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 TRAV12-2A0A075B6T6 113 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 SMIM9A6NGZ8 99 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF253O75346 499 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 NDUFB4O95168 129 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 AMBPP02760 352 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 PRM2P04554 102 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 PYYP10082 97 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 RPL12P30050 165 aaKnown RBP4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 FCN2Q15485 313 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 GUK1Q16774 197 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 MIR17HGQ75NE6 70 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 FAM167A-AS1Q96KT0 104 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 SLC25A2Q9BXI2 301 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 SMIM3Q9BZL3 60 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 WFDC1Q9HC57 220 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 TMEM14CQ9P0S9 112 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 RFNGQ9Y644 331 aa4.3□□□□□ -1.72
CTDSPL2-204ENST00000558966 FRAS1Q86XX4 4008 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 TRAV10A0A0B4J240 114 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 TMEM189A5PLL7 270 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 C11orf94C9JXX5 98 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 M0R3E3 92 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 LY6G6CO95867 125 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 INSP01308 110 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 HBE1P02100 147 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 HIST1H1EP10412 219 aaKnown RBP4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 EMP1P54849 157 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 RHOBP62745 196 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 KCNIP2Q9NS61 270 aa4.29□□□□□ -1.72
CTDSPL2-204ENST00000558966 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF705GA8MUZ8 300 aaPredicted RBP4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 IGLL5B9A064 214 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 C17orf112F2Z3M2 114 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 SPART-AS1P0CW21 52 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 PDE6HQ13956 83 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 RRN3P1Q2M238 152 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 FAM222AQ5U5X8 452 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 MRPL53Q96EL3 112 aaKnown RBP4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 TMEM208Q9BTX3 173 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 MED28Q9H204 178 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 APLNQ9ULZ1 77 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 FUT9Q9Y231 359 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 YTHDF2Q9Y5A9 579 aaKnown RBP4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 IFNA5P01569 189 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 AZU1P20160 251 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 CDKN1BP46527 198 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 Q5BKY6 102 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 FFAR4Q5NUL3 377 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 LGALS9CQ6DKI2 356 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 SUMO4Q6EEV6 95 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 EXOC3-AS1Q8N2X6 119 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 RPP25LQ8N5L8 163 aaKnown RBP4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 OR10J6PQ8NGY7 276 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 BLNKQ8WV28 456 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 FXYD5Q96DB9 178 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 PHYHIPLQ96FC7 376 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 DNAH2Q9P225 4427 aa4.28□□□□□ -1.72
CTDSPL2-204ENST00000558966 BIRC6Q9NR09 4857 aa4.28□□□□□ -1.73
CTDSPL2-204ENST00000558966 IGHV4-4A0A075B6R2 117 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 DEFB131BA0A096LNP1 70 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 EIF3GO75821 320 aaKnown RBP eCLIP4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 SCGB1D1O95968 90 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 GIPP09681 153 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR10J4P0C629 311 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 NBEAP1P0C6P0 100 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 CT45A10P0DMU9 189 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 TSPOP30536 169 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 TCTAP57738 103 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 OXA1LQ15070 435 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 RGS21Q2M5E4 152 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 GFI1BQ5VTD9 330 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 TMEM256Q8N2U0 113 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 SCGB1C1Q8TD33 95 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 AQP10Q96PS8 301 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 ODF3Q96PU9 254 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 NIPSNAP3BQ9BS92 247 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 PAXXQ9BUH6 204 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR51M1Q9H341 326 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 TIMM9Q9Y5J7 89 aa4.27□□□□□ -1.73
CTDSPL2-204ENST00000558966 IGKV2-40A0A087WW87 121 aaPredicted RBP4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 TEX48A0A1B0GUV7 120 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 G3V3Q6 166 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms