RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 FAM19A4Q96LR4 140 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 Q9H3A6 140 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 COL7A1Q02388 2944 aa5.31□□□□□ -1.56
TRAF3-206ENST00000558880 A0A0J9YX75 114 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 A0A1W2PRE2 83 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 OR4C46A6NHA9 309 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 H3BMM0 161 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 TEX46H3BTG2 121 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 PAGE4O60829 102 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 MEOX2P50222 304 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 CD81P60033 236 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 GNG5P63218 68 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 PSMG4Q5JS54 123 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 TRPT1Q86TN4 253 aaKnown RBP5.3□□□□□ -1.56
TRAF3-206ENST00000558880 LYPD1Q8N2G4 141 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 MRPL53Q96EL3 112 aaKnown RBP5.3□□□□□ -1.56
TRAF3-206ENST00000558880 TVP23CQ96ET8 276 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 RARRES2Q99969 163 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 SLC50A1Q9BRV3 221 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 GPR61Q9BZJ8 451 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 SAV1Q9H4B6 383 aaPredicted RBP5.3□□□□□ -1.56
TRAF3-206ENST00000558880 OTORQ9NRC9 128 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 TMEM167BQ9NRX6 74 aa5.3□□□□□ -1.56
TRAF3-206ENST00000558880 LOC102723971A0A1B0GUV8 181 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 PGPA6NDG6 321 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 OR11H12B2RN74 326 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 DIRC3C9JPN6 131 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 DNASE2O00115 360 aaPredicted RBP5.29□□□□□ -1.56
TRAF3-206ENST00000558880 CRXO43186 299 aaPredicted RBP5.29□□□□□ -1.56
TRAF3-206ENST00000558880 RBMY1A1P0DJD3 496 aaKnown RBP5.29□□□□□ -1.56
TRAF3-206ENST00000558880 RBMY1CP0DJD4 496 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 CT45A10P0DMU9 189 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 IGHV4-30-4P0DP06 118 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 HLA-DRB4P13762 266 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 S100A7P31151 101 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 UBE2G2P60604 165 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 ERCC8Q13216 396 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 RBMY1FQ15415 496 aaKnown RBP5.29□□□□□ -1.56
TRAF3-206ENST00000558880 CLLU1Q5K131 121 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 FOXI2Q6ZQN5 318 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 S100A7AQ86SG5 101 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 OR8A1Q8NGG7 326 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 RPUSD4Q96CM3 377 aaKnown RBP5.29□□□□□ -1.56
TRAF3-206ENST00000558880 LINC00479Q96M42 142 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 LINC00052Q96N35 136 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 ASCL2Q99929 193 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 VGLL1Q99990 258 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 AGPAT4-IT1Q9H0P7 198 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 RNF24Q9Y225 148 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 ARL2-SNX15V9GYD0 113 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 HLA-DRB4X5D2U9 266 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 TENM2Q9NT68 2774 aa5.29□□□□□ -1.56
TRAF3-206ENST00000558880 IGKV2-40A0A087WW87 121 aaPredicted RBP5.28□□□□□ -1.56
TRAF3-206ENST00000558880 TRAV8-1A0A0A6YYK1 113 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 IFNA7P01567 189 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 IGKV2D-40P01614 121 aaPredicted RBP5.28□□□□□ -1.56
TRAF3-206ENST00000558880 TCRAP04437 139 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 BCL2P10415 239 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 CNN1P51911 297 aaKnown RBP5.28□□□□□ -1.56
TRAF3-206ENST00000558880 PAFAH1B2P68402 229 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 BLOC1S1P78537 153 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 PSG9Q00887 426 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 PRR9Q5T870 116 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 Q6ZQT7 251 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF767PQ75MW2 155 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 ZNF575Q86XF7 245 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 ARL6IP6Q8N6S5 226 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 CSNK1G2-AS1Q8NCQ2 148 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 C2CD4CQ8TF44 421 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 C11orf52Q96A22 123 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 GNG13Q9P2W3 67 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 EPDR1Q9UM22 224 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 KLF12Q9Y4X4 402 aa5.28□□□□□ -1.56
TRAF3-206ENST00000558880 DYNC2H1Q8NCM8 4307 aaKnown RBP5.28□□□□□ -1.56
TRAF3-206ENST00000558880 TRBV20OR9-2A0A075B6H5 130 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 C3orf84H3BNL1 204 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 ID1P41134 155 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 HAGHQ16775 308 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 ZNF506Q5JVG8 444 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 ACTL10Q5JWF8 245 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 SAMD13Q5VXD3 122 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 C9orf47Q6ZRZ4 202 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 ZFAND2AQ8N6M9 145 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 C5orf17Q8NAS9 161 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 ZNF738Q8NE65 137 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 LRRC20Q8TCA0 184 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 SGK494Q96LW2 274 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 FAM210AQ96ND0 272 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 DERL1Q9BUN8 251 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 SLC35B3Q9H1N7 401 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 SRD5A3Q9H8P0 318 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 PPP1R14DQ9NXH3 145 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 PRELID1Q9Y255 219 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 AGRNO00468 2067 aa5.27□□□□□ -1.57
TRAF3-206ENST00000558880 TRAV34A0A0B4J273 112 aa5.26□□□□□ -1.57
TRAF3-206ENST00000558880 RBAKDNA6NC62 111 aa5.26□□□□□ -1.57
TRAF3-206ENST00000558880 C11orf94C9JXX5 98 aa5.26□□□□□ -1.57
TRAF3-206ENST00000558880 IGLV2-8P01709 118 aa5.26□□□□□ -1.57
TRAF3-206ENST00000558880 HBE1P02100 147 aa5.26□□□□□ -1.57
TRAF3-206ENST00000558880 SRP19P09132 144 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms