RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 UBQLN2Q9UHD9 624 aa4.37□□□□□ -1.71
LRRC28-209ENST00000558861 SMAD5-AS1Q9Y6J3 95 aa4.37□□□□□ -1.71
LRRC28-209ENST00000558861 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 FXYD6-FXYD2A0A087WZ82 144 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 TRAV2A0A0B4J234 112 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 A0A0J9YWU9 116 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 ZNF98A6NK75 572 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 K7EQG2 157 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 SCGB2A1O75556 95 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 C1QBP02746 253 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 FABP1P07148 127 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 CD7P09564 240 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 OR5G3P0C626 314 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 GP9P14770 177 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 FGF7P21781 194 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 FHITP49789 147 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 B2MP61769 119 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 ZNF345Q14585 488 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 RPL7L1Q6DKI1 246 aaKnown RBP4.36□□□□□ -1.71
LRRC28-209ENST00000558861 LAMTOR1Q6IAA8 161 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 LINC00322Q6ZN03 302 aaPredicted RBP4.36□□□□□ -1.71
LRRC28-209ENST00000558861 KCNRGQ8N5I3 272 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 OR2G3Q8NGZ4 309 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
LRRC28-209ENST00000558861 FAM167A-AS1Q96KT0 104 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 RSG1Q9BU20 258 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 SCRT1Q9BWW7 348 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 SMIM3Q9BZL3 60 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 RABAC1Q9UI14 185 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 PXMP4Q9Y6I8 212 aa4.36□□□□□ -1.71
LRRC28-209ENST00000558861 AGRNO00468 2067 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 ARPC5O15511 151 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 HYPMO75409 117 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 CD5P06127 495 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 IGLC2P0DOY2 106 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 ORM2P19652 201 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 DEFA6Q01524 100 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 LGALSLQ3ZCW2 172 aaPredicted RBP4.35□□□□□ -1.71
LRRC28-209ENST00000558861 SPATA31B1PQ5VZV4 182 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 LEMD1Q68G75 181 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 TCF24Q7RTU0 167 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 OR1B1Q8NGR6 318 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 DYNLRB2Q8TF09 96 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 PBDC1Q9BVG4 233 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 ARL6Q9H0F7 186 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 WFDC10AQ9H1F0 79 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 MS4A6AQ9H2W1 248 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 DOK5Q9P104 306 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 HIGD1AQ9Y241 93 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 TIMM9Q9Y5J7 89 aa4.35□□□□□ -1.71
LRRC28-209ENST00000558861 TRAV8-2A0A0B4J237 113 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 TRAV5A0A0B4J249 113 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 ATP6V0CP27449 155 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-209ENST00000558861 ID1P41134 155 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 RAB31Q13636 194 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 LINC00305Q7Z4B0 112 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 AKAP14Q86UN6 197 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 C9orf62Q8N4C0 152 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 RPP25LQ8N5L8 163 aaKnown RBP4.34□□□□□ -1.71
LRRC28-209ENST00000558861 INO80EQ8NBZ0 244 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-209ENST00000558861 PSMG3Q9BT73 122 aaPredicted RBP4.34□□□□□ -1.71
LRRC28-209ENST00000558861 SH3BGRL3Q9H299 93 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 TMEM231Q9H6L2 316 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 NRN1Q9NPD7 142 aa4.34□□□□□ -1.71
LRRC28-209ENST00000558861 ZMAT5Q9UDW3 170 aaKnown RBP4.34□□□□□ -1.71
LRRC28-209ENST00000558861 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 RBMY1BA6NDE4 496 aaKnown RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 RBMY1EA6NEQ0 496 aaKnown RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 HELTA6NFD8 242 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 A8MTW9 85 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 H3BQ15 152 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 SLC17A3O00476 420 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 TAAR5O14804 337 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 ATP6V1G1O75348 118 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 IFNA5P01569 189 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 GIG44P09565 113 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 RBMY1DP0C7P1 496 aaKnown RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 BMI1P35226 326 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 AP2S1P53680 142 aaPredicted RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 NDUFV3P56181 108 aaKnown RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 RAB2AP61019 212 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 HERV-K104P63124 156 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF266Q14584 549 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF726P1Q15940 193 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 GUCA2BQ16661 112 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 SSX7Q7RTT5 188 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 HSD17B11Q8NBQ5 300 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 STOML3Q8TAV4 291 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 GPR82Q96P67 336 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 PFDN5Q99471 154 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 SLC25A2Q9BXI2 301 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 TMEM14CQ9P0S9 112 aa4.33□□□□□ -1.72
LRRC28-209ENST00000558861 KMT2CQ8NEZ4 4911 aaKnown RBP4.33□□□□□ -1.72
LRRC28-209ENST00000558861 IGKV3-7A0A075B6H7 116 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms