RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 ZNF253O75346 499 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 NBEAP1P0C6P0 100 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 ZNF705DP0CH99 300 aaPredicted RBP10.9□□□□□ -0.66
CPNE6-208ENST00000558795 ZNF705BP0CI00 300 aaPredicted RBP10.9□□□□□ -0.66
CPNE6-208ENST00000558795 SULT1A2P50226 295 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 FXYD7P58549 80 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 PDE6HQ13956 83 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 FAM213BQ8TBF2 198 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 DKK2Q9UBU2 259 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 PKD1P98161 4303 aa10.9□□□□□ -0.66
CPNE6-208ENST00000558795 TRBV19A0A075B6N1 114 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 SOCS3O14543 225 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 OR10J4P0C629 311 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 ARL14EPLP0DKL9 152 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 UBE2L3P68036 154 aaKnown RBP10.89□□□□□ -0.67
CPNE6-208ENST00000558795 PSG9Q00887 426 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 ZNF726P1Q15940 193 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 MAPKAPK5-AS1Q8N8E1 139 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 BLNKQ8WV28 456 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 FXYD5Q96DB9 178 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 SAT2Q96F10 170 aaPredicted RBP10.89□□□□□ -0.67
CPNE6-208ENST00000558795 ZNF503Q96F45 646 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 C17orf77Q96MU5 243 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 NACAE9PAV3 2078 aa10.89□□□□□ -0.67
CPNE6-208ENST00000558795 EIF3GO75821 320 aaKnown RBP eCLIP10.88□□□□□ -0.67
CPNE6-208ENST00000558795 CDK2AP2O75956 126 aa10.88□□□□□ -0.67
CPNE6-208ENST00000558795 SNRPCP09234 159 aaKnown RBP10.88□□□□□ -0.67
CPNE6-208ENST00000558795 FHITP49789 147 aa10.88□□□□□ -0.67
CPNE6-208ENST00000558795 LINC00052Q96N35 136 aa10.88□□□□□ -0.67
CPNE6-208ENST00000558795 ZNF331Q9NQX6 463 aaPredicted RBP10.88□□□□□ -0.67
CPNE6-208ENST00000558795 TMEM167BQ9NRX6 74 aa10.88□□□□□ -0.67
CPNE6-208ENST00000558795 DYNC1H1Q14204 4646 aaKnown RBP10.88□□□□□ -0.67
CPNE6-208ENST00000558795 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 MAP1LC3B2A6NCE7 125 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 TEX46H3BTG2 121 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 H3BTX0 84 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 GCHFRP30047 84 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 GDF5OSQ5U4N7 250 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 ALKAL2Q6UX46 152 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 SSX7Q7RTT5 188 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 LYPD1Q8N2G4 141 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 SFT2D1Q8WV19 159 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 MBD3L1Q8WWY6 194 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 MAP1LC3BQ9GZQ8 125 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 AAMDCQ9H7C9 122 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 GOLT1BQ9Y3E0 138 aa10.87□□□□□ -0.67
CPNE6-208ENST00000558795 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 LOC102723971A0A1B0GUV8 181 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 HBE1P02100 147 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
CPNE6-208ENST00000558795 IQCF2Q8IXL9 164 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 OR4B1Q8NGF8 309 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 SUN5Q8TC36 379 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 ATG101Q9BSB4 218 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 PRELID1Q9Y255 219 aa10.86□□□□□ -0.67
CPNE6-208ENST00000558795 SLC17A3O00476 420 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 NDUFB4O95168 129 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 FGF8P55075 233 aaPredicted RBP10.85□□□□□ -0.67
CPNE6-208ENST00000558795 DEFB1P60022 68 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 DAD1P61803 113 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 TNP2Q05952 138 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 PSG3Q16557 428 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 FAM74A1Q5RGS3 127 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 IGFL4Q6B9Z1 124 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 TEX261Q6UWH6 196 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 FOXI2Q6ZQN5 318 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
CPNE6-208ENST00000558795 SAV1Q9H4B6 383 aaPredicted RBP10.85□□□□□ -0.67
CPNE6-208ENST00000558795 YTHDF2Q9Y5A9 579 aaKnown RBP10.85□□□□□ -0.67
CPNE6-208ENST00000558795 IFNA7P01567 189 aa10.84□□□□□ -0.67
CPNE6-208ENST00000558795 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
CPNE6-208ENST00000558795 BLOC1S1P78537 153 aa10.84□□□□□ -0.67
CPNE6-208ENST00000558795 RRN3P1Q2M238 152 aa10.84□□□□□ -0.67
CPNE6-208ENST00000558795 RNF182Q8N6D2 247 aa10.84□□□□□ -0.67
CPNE6-208ENST00000558795 ZNF738Q8NE65 137 aa10.84□□□□□ -0.67
CPNE6-208ENST00000558795 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
CPNE6-208ENST00000558795 C20orf173Q96LM9 149 aa10.84□□□□□ -0.67
CPNE6-208ENST00000558795 TRAV1-1A0A0B4J248 108 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 PPT1P50897 306 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 ICAM4Q14773 271 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 EBLN2Q6P2I7 272 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 EXOC3-AS1Q8N2X6 119 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 CLUHP3Q96NS8 147 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 SLC35B3Q9H1N7 401 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 Q9H3A6 140 aa10.83□□□□□ -0.68
CPNE6-208ENST00000558795 PGPA6NDG6 321 aa10.82□□□□□ -0.68
CPNE6-208ENST00000558795 CSN1S1P47710 185 aa10.82□□□□□ -0.68
CPNE6-208ENST00000558795 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
CPNE6-208ENST00000558795 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
CPNE6-208ENST00000558795 RPUSD4Q96CM3 377 aaKnown RBP10.82□□□□□ -0.68
CPNE6-208ENST00000558795 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
CPNE6-208ENST00000558795 TMPRSS5Q9H3S3 457 aa10.82□□□□□ -0.68
CPNE6-208ENST00000558795 OTORQ9NRC9 128 aa10.82□□□□□ -0.68
CPNE6-208ENST00000558795 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
CPNE6-208ENST00000558795 A0A1W2PRE2 83 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms