RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 NRARPQ7Z6K4 114 aa5.67□□□□□ -1.5
TRAF3-205ENST00000558700 C12orf45Q8N5I9 185 aaPredicted RBP5.67□□□□□ -1.5
TRAF3-205ENST00000558700 RNASE8Q8TDE3 154 aaKnown RBP5.67□□□□□ -1.5
TRAF3-205ENST00000558700 TMEM37Q8WXS4 190 aa5.67□□□□□ -1.5
TRAF3-205ENST00000558700 C2orf50Q96LR7 162 aa5.67□□□□□ -1.5
TRAF3-205ENST00000558700 ODF3Q96PU9 254 aa5.67□□□□□ -1.5
TRAF3-205ENST00000558700 C11orf1Q9H5F2 150 aa5.67□□□□□ -1.5
TRAF3-205ENST00000558700 LYRM2Q9NU23 88 aaPredicted RBP5.67□□□□□ -1.5
TRAF3-205ENST00000558700 WDR83OSQ9Y284 106 aa5.67□□□□□ -1.5
TRAF3-205ENST00000558700 FAM24AA6NFZ4 105 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 SNURFLB1AK76 121 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 H3BTX0 84 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 ZNF253O75346 499 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 NUDT3O95989 172 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 PRM2P04554 102 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 SNRPCP09234 159 aaKnown RBP5.66□□□□□ -1.5
TRAF3-205ENST00000558700 AZU1P20160 251 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 S100A11P31949 105 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 RPL29P47914 159 aaKnown RBP5.66□□□□□ -1.5
TRAF3-205ENST00000558700 C1orf134Q5TEV5 83 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 GFI1BQ5VTD9 330 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 MORN5Q5VZ52 161 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 DNAJC4Q9NNZ3 241 aa5.66□□□□□ -1.5
TRAF3-205ENST00000558700 NOP10Q9NPE3 64 aaKnown RBP5.66□□□□□ -1.5
TRAF3-205ENST00000558700 FAM240BA0A1B0GVZ2 78 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 IGSF23A1L1A6 192 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 H3BQ15 152 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 MPDU1O75352 247 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 RLN2P04090 185 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 PRB4P10163 310 aaPredicted RBP5.65□□□□□ -1.5
TRAF3-205ENST00000558700 FGF7P21781 194 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 CAMPP49913 170 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 CCL18P55774 89 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 PDE6HQ13956 83 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 CLINT1Q14677 625 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 ATP6V1FQ16864 119 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 TMEM252Q8N6L7 170 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 MRPL53Q96EL3 112 aaKnown RBP5.65□□□□□ -1.5
TRAF3-205ENST00000558700 PYGO2Q9BRQ0 406 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 PARD6GQ9BYG4 376 aaPredicted RBP5.65□□□□□ -1.5
TRAF3-205ENST00000558700 GPN1Q9HCN4 374 aaPredicted RBP5.65□□□□□ -1.5
TRAF3-205ENST00000558700 KCNIP2Q9NS61 270 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 SLC39A9Q9NUM3 307 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 TMEM14CQ9P0S9 112 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 PRELID1Q9Y255 219 aa5.65□□□□□ -1.5
TRAF3-205ENST00000558700 TRBV19A0A075B6N1 114 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 NBDYA0A0U1RRE5 68 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 M6PRP20645 277 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 ASAH1Q13510 395 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 FCN2Q15485 313 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 TTC32Q5I0X7 151 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 LINC00299Q6ZSB3 139 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 LINC00612Q8N6U2 182 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 ZNF680Q8NEM1 530 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 ENKURQ8TC29 256 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 S100ZQ8WXG8 99 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 GNPNAT1Q96EK6 184 aaPredicted RBP5.64□□□□□ -1.51
TRAF3-205ENST00000558700 AAMDCQ9H7C9 122 aa5.64□□□□□ -1.51
TRAF3-205ENST00000558700 KIAA1109Q2LD37 5005 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 TRAV5A0A0B4J249 113 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 TRAV12-3A0A0B4J271 114 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 C7orf71A4D174 169 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 PRAC2D3DTV9 90 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 SLC25A5P05141 298 aaKnown RBP5.63□□□□□ -1.51
TRAF3-205ENST00000558700 HIST1H1EP10412 219 aaKnown RBP5.63□□□□□ -1.51
TRAF3-205ENST00000558700 IL15RAQ13261 267 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 C6orf223Q8N319 242 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 ZNRF2Q8NHG8 242 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 RXFP4Q8TDU9 374 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 ZNF503Q96F45 646 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 NPCDR1Q9BY65 106 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 SLC25A31Q9H0C2 315 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 ZNF586Q9NXT0 402 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 TIMM9Q9Y5J7 89 aa5.63□□□□□ -1.51
TRAF3-205ENST00000558700 TRAV26-1A0A087WT03 109 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 E5RGE8 158 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 H3BNG1 76 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 M0R3E3 92 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 PRAF2O60831 178 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 GAGE7O76087 117 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 GAGE12FP0CL80 117 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 GAGE12GP0CL81 117 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 GAGE12IP0CL82 117 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 CT45A10P0DMU9 189 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 PYYP10082 97 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 DAZ2Q13117 558 aaKnown RBP5.62□□□□□ -1.51
TRAF3-205ENST00000558700 OR5I1Q13606 314 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 SSX7Q7RTT5 188 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 MRPL32Q9BYC8 188 aaKnown RBP5.62□□□□□ -1.51
TRAF3-205ENST00000558700 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 LINC00588Q9Y4M8 146 aa5.62□□□□□ -1.51
TRAF3-205ENST00000558700 KLLNB2CW77 178 aa5.61□□□□□ -1.51
TRAF3-205ENST00000558700 C17orf112F2Z3M2 114 aa5.61□□□□□ -1.51
TRAF3-205ENST00000558700 NDUFB4O95168 129 aa5.61□□□□□ -1.51
TRAF3-205ENST00000558700 CYCSP99999 105 aaKnown RBP5.61□□□□□ -1.51
TRAF3-205ENST00000558700 TMEM78Q5T7P6 136 aa5.61□□□□□ -1.51
TRAF3-205ENST00000558700 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
TRAF3-205ENST00000558700 ZNF575Q86XF7 245 aa5.61□□□□□ -1.51
TRAF3-205ENST00000558700 EIF4E3Q8N5X7 224 aaKnown RBP5.61□□□□□ -1.51
TRAF3-205ENST00000558700 OR5C1Q8NGR4 320 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms