RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 I3L2K1 104 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 CRYGBP07316 175 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 EGR2P11161 476 aaPredicted RBP12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 HERV-K104P63124 156 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 SHISA2Q6UWI4 295 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 TMEM126AQ9H061 195 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 RAB1BQ9H0U4 201 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 RAXQ9Y2V3 346 aa12.66□□□□□ -0.38
HMBOX1-212ENST00000558662 LOC107984156A0A0G2JMH3 177 aa12.65□□□□□ -0.38
HMBOX1-212ENST00000558662 FCN3O75636 299 aa12.65□□□□□ -0.38
HMBOX1-212ENST00000558662 ARL17AQ8IVW1 177 aa12.65□□□□□ -0.38
HMBOX1-212ENST00000558662 IGKV1-17P01599 117 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 ARL3P36405 182 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 ORMDL2Q53FV1 153 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 ZNF474Q6S9Z5 364 aaPredicted RBP12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 CD7P09564 240 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 Q71RC1 249 aaPredicted RBP12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 RNF125Q96EQ8 232 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 CCL13Q99616 98 aa12.64□□□□□ -0.39
HMBOX1-212ENST00000558662 RAI1Q7Z5J4 1906 aaPredicted RBP12.63□□□□□ -0.39
HMBOX1-212ENST00000558662 RUSC1-AS1Q66K80 236 aa12.63□□□□□ -0.39
HMBOX1-212ENST00000558662 PPP1R27Q86WC6 154 aa12.63□□□□□ -0.39
HMBOX1-212ENST00000558662 RNF5Q99942 180 aa12.63□□□□□ -0.39
HMBOX1-212ENST00000558662 DEFB127Q9H1M4 99 aa12.63□□□□□ -0.39
HMBOX1-212ENST00000558662 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 SRSF9Q13242 221 aaKnown RBP eCLIP12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 DTX2Q86UW9 622 aa12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 ANKRD29Q8N6D5 301 aa12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 ZNF491Q8N8L2 437 aa12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
HMBOX1-212ENST00000558662 NAV3Q8IVL0 2385 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 NDUFA3O95167 84 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 IGHG3P01860 377 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 RPL7P18124 248 aaKnown RBP12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 CXCL12P48061 93 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 TNFAIP6P98066 277 aaPredicted RBP12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 C1orf122Q6ZSJ8 110 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 FAM216BQ8N7L0 139 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 C17orf77Q96MU5 243 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 ASCL2Q99929 193 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 SPRY4Q9C004 299 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 SIGLEC9Q9Y336 463 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 SLC25A15Q9Y619 301 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 IGHV4-4A0A075B6R2 117 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 TEX22C9J3V5 150 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 SPRY3O43610 288 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 TCL1BO95988 128 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 CLEC3BP05452 202 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 HLA-DMBP28068 263 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 AJUBAQ96IF1 538 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 PSMG3-AS1Q96PY0 264 aa12.61□□□□□ -0.39
HMBOX1-212ENST00000558662 RBAKDNA6NC62 111 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 FAM90A27PA6NNH2 459 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 NRACQ8N912 160 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 TOMM6Q96B49 74 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 SPANXCQ9NY87 97 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 ZNRD1Q9P1U0 126 aa12.6□□□□□ -0.39
HMBOX1-212ENST00000558662 ZNF815PA8K554 130 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 M0R3E3 92 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 CD59P13987 128 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 HERVK_113P61574 105 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 DUX4L9Q6RFH8 374 aaPredicted RBP12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 SMIM20Q8N5G0 67 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 CNEP1R1Q8N9A8 125 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 NEXN-AS1Q8NBZ9 246 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 TPSG1Q9NRR2 321 aa12.59□□□□□ -0.39
HMBOX1-212ENST00000558662 SCGB2A1O75556 95 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 P0DMU3 169 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 FAM231AP0DMU4 169 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 FAM231CP0DMU5 169 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 COX6B1P14854 86 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 ZFP2Q6ZN57 461 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 ASCL5Q7RTU5 278 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 PRADC1Q9BSG0 188 aa12.58□□□□□ -0.39
HMBOX1-212ENST00000558662 SLC25A20O43772 301 aa12.58□□□□□ -0.4
HMBOX1-212ENST00000558662 ORM1P02763 201 aa12.58□□□□□ -0.4
HMBOX1-212ENST00000558662 LY6DQ14210 128 aa12.58□□□□□ -0.4
HMBOX1-212ENST00000558662 MSMPQ1L6U9 139 aa12.58□□□□□ -0.4
HMBOX1-212ENST00000558662 PTH2Q96A98 100 aa12.58□□□□□ -0.4
HMBOX1-212ENST00000558662 MDFICQ9P1T7 246 aa12.58□□□□□ -0.4
HMBOX1-212ENST00000558662 DIAPH2-AS1Q14236 149 aa12.57□□□□□ -0.4
HMBOX1-212ENST00000558662 SPRNQ5BIV9 151 aa12.57□□□□□ -0.4
HMBOX1-212ENST00000558662 FAM201AQ5SY85 155 aa12.57□□□□□ -0.4
HMBOX1-212ENST00000558662 TMEM200BQ69YZ2 307 aa12.57□□□□□ -0.4
HMBOX1-212ENST00000558662 SLC50A1Q9BRV3 221 aa12.57□□□□□ -0.4
HMBOX1-212ENST00000558662 PRO1854Q9UHT4 67 aa12.57□□□□□ -0.4
HMBOX1-212ENST00000558662 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 IGHV1-46P01743 117 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 PMS2CLQ68D20 193 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 ZNF575Q86XF7 245 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 SCGB3A1Q96QR1 104 aa12.56□□□□□ -0.4
HMBOX1-212ENST00000558662 SMIM2Q9BVW6 85 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms