RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 GP9P14770 177 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 CCL8P80075 99 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 KLRB1Q12918 225 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 RRN3P1Q2M238 152 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 FAM53AQ6NSI3 398 aaPredicted RBP4.36□□□□□ -1.71
GABPB1-207ENST00000558335 SIGLEC15Q6ZMC9 328 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 Q86TA4 180 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 DTX2Q86UW9 622 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 SBSPONQ8IVN8 264 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 COPS9Q8WXC6 57 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 CCL17Q92583 94 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 RND1Q92730 232 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 PLEKHB2Q96CS7 222 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 LINC01600Q96MT4 127 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 Q9H3A6 140 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 FBXL15Q9H469 300 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 AP5S1Q9NUS5 200 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 RNF114Q9Y508 228 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 A0A0C4DFX4 3053 aa4.36□□□□□ -1.71
GABPB1-207ENST00000558335 IGKV1D-37A0A075B6S9 117 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 IGHV1-3A0A0C4DH29 117 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 A8MWV9 139 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 BUB1B-PAK6H3BSN5 160 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 J3QL48 77 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 M0R1W7 72 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 SPINK4O60575 86 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 DPM2O94777 84 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 IGLV1-47P01700 117 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 TFF1P04155 84 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 PYYP10082 97 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 LOXP28300 417 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-207ENST00000558335 BSPH1Q075Z2 132 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 FAM27E3Q08E93 113 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 DIAPH2-AS1Q14236 149 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 MSMPQ1L6U9 139 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 LGALS9BQ3B8N2 356 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 C9orf153Q5TBE3 101 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 CFAP126Q5VTH2 177 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 GFRALQ6UXV0 394 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 PATE2Q6UY27 113 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 C1orf229Q6ZS94 237 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-207ENST00000558335 GOLT1AQ6ZVE7 132 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 COX8CQ7Z4L0 72 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 SH2D6Q7Z4S9 175 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 RPRMLQ8N4K4 120 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 C15orf53Q8NAA6 179 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 MYOZ3Q8TDC0 251 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 VKORC1Q9BQB6 163 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 SHANK2-AS3Q9BTD1 123 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 SLC25A39Q9BZJ4 359 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-207ENST00000558335 C7orf69Q9H7B7 122 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 TECTAO75443 2155 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 INTS1Q8N201 2190 aaKnown RBP4.35□□□□□ -1.71
GABPB1-207ENST00000558335 DIDO1Q9BTC0 2240 aaKnown RBP4.35□□□□□ -1.71
GABPB1-207ENST00000558335 CDH23Q9H251 3354 aa4.35□□□□□ -1.71
GABPB1-207ENST00000558335 DSCAMO60469 2012 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 TRBV19A0A075B6N1 114 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 FAM240AA0A1B0GVK7 77 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 LINC01549A6NIU2 74 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 F2Z2F3 143 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 K7ENP7 123 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 NDUFS7O75251 213 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 ACYP1P07311 99 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 FGF6P10767 208 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 CRYGAP11844 174 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 HOXB4P17483 251 aaPredicted RBP4.34□□□□□ -1.71
GABPB1-207ENST00000558335 LYZP61626 148 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 HERVK_113P63121 156 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 FBXL19-AS1Q494R0 122 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 SPRNQ5BIV9 151 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 MINOS1Q5TGZ0 78 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 ZNF841Q6ZN19 808 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 ZNF493Q6ZR52 646 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 Q71RC1 249 aaPredicted RBP4.34□□□□□ -1.71
GABPB1-207ENST00000558335 FAM19A2Q8N3H0 131 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 NPBQ8NG41 125 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 PRSS3P2Q8NHM4 247 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
GABPB1-207ENST00000558335 SRSF12Q8WXF0 261 aaKnown RBP4.34□□□□□ -1.71
GABPB1-207ENST00000558335 BAALCQ8WXS3 180 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 C1orf43Q9BWL3 253 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 DPM3Q9P2X0 92 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 TP53TG1Q9Y2A0 90 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 MINOS1-NBL1R4GNA1 71 aa4.34□□□□□ -1.71
GABPB1-207ENST00000558335 PRR14LQ5THK1 2151 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 A0A0G2JNJ9 132 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 hDV102S1A0JD36 115 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 H3BRN7 92 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 I3L2K1 104 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 TRACP01848 142 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 CCL3L1P16619 93 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 HLA-DMBP28068 263 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 FAM201AQ5SY85 155 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 PRNTQ86SH4 94 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 PRIMA1Q86XR5 153 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 CEND1Q8N111 149 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms