RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 G3V4G9 280 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 HLA-DRB4P13762 266 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 HLA-DMBP28068 263 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 LEPP41159 167 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 GNG5P63218 68 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 HIST1H1AQ02539 215 aaPredicted RBP9.24□□□□□ -0.93
TPM1-209ENST00000558072 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 IGFL4Q6B9Z1 124 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 BAGE2Q86Y30 109 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 C20orf173Q96LM9 149 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 HLA-DRB4X5D2U9 266 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 SORL1Q92673 2214 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 TRRAPQ9Y4A5 3859 aa9.24□□□□□ -0.93
TPM1-209ENST00000558072 CT45A10P0DMU9 189 aa9.23□□□□□ -0.93
TPM1-209ENST00000558072 PRB4P10163 310 aaPredicted RBP9.23□□□□□ -0.93
TPM1-209ENST00000558072 ZNF674Q2M3X9 581 aa9.23□□□□□ -0.93
TPM1-209ENST00000558072 ODF3L2Q3SX64 289 aa9.23□□□□□ -0.93
TPM1-209ENST00000558072 MORN3Q6PF18 240 aaPredicted RBP9.23□□□□□ -0.93
TPM1-209ENST00000558072 ZNF492Q9P255 531 aa9.23□□□□□ -0.93
TPM1-209ENST00000558072 IGKV2-40A0A087WW87 121 aaPredicted RBP9.22□□□□□ -0.93
TPM1-209ENST00000558072 LTAP01374 205 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 IGKV2D-40P01614 121 aaPredicted RBP9.22□□□□□ -0.93
TPM1-209ENST00000558072 SRSF3P84103 164 aaKnown RBP9.22□□□□□ -0.93
TPM1-209ENST00000558072 SMUG1Q53HV7 270 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 ACTL10Q5JWF8 245 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 SAMD5Q5TGI4 173 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 TMEM183AQ8IXX5 376 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 FAM24BQ8N5W8 94 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 C1QTNF4Q9BXJ3 329 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 AGPAT4-IT1Q9H0P7 198 aa9.22□□□□□ -0.93
TPM1-209ENST00000558072 NOTCH3Q9UM47 2321 aa9.21□□□□□ -0.93
TPM1-209ENST00000558072 A8MTW9 85 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 PRAC2D3DTV9 90 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 H3BMM0 161 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 PRB2P02812 416 aaPredicted RBP9.21□□□□□ -0.94
TPM1-209ENST00000558072 S100A1P23297 94 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 CENPWQ5EE01 88 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 COX8CQ7Z4L0 72 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 Q86TA4 180 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 OR4B1Q8NGF8 309 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 TVP23CQ96ET8 276 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 PRR25Q96S07 402 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 ASCL2Q99929 193 aa9.21□□□□□ -0.94
TPM1-209ENST00000558072 B4DEV8 164 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 C9JQL5 133 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 CD7P09564 240 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 CRISP2P16562 243 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 C10orf91Q5T1B1 145 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 SLC7A5P1Q8MH63 180 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
TPM1-209ENST00000558072 VGLL1Q99990 258 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 C20orf144Q9BQM9 153 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 TUBA4BQ9H853 241 aa9.2□□□□□ -0.94
TPM1-209ENST00000558072 CARHSP1Q9Y2V2 147 aaKnown RBP9.2□□□□□ -0.94
TPM1-209ENST00000558072 TRAV34A0A0B4J273 112 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 IGLV2-11P01706 119 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 GPX1P07203 203 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 CDKN1BP46527 198 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 APRG1Q8IVJ8 170 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 SVBPQ8N300 66 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 IGF2BP2-AS1Q96M15 143 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 LINC00479Q96M42 142 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 C19orf73Q9NVV2 129 aa9.19□□□□□ -0.94
TPM1-209ENST00000558072 TRAV8-1A0A0A6YYK1 113 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 KIR2DL5BA0A0G2JN68 375 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 KIR2DL5BA0A0G2JPC4 375 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 FABP5P3A8MUU1 101 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 A8MZ25 164 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 F6UB75 175 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 PPP1R2P9O14990 202 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 SNAPINO95295 136 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 MGST1P10620 155 aaKnown RBP9.18□□□□□ -0.94
TPM1-209ENST00000558072 APOC4P55056 127 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 ERCC8Q13216 396 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 TRPT1Q86TN4 253 aaKnown RBP9.18□□□□□ -0.94
TPM1-209ENST00000558072 KIR2DL5AQ8N109 375 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 C15orf54Q8N8G6 183 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 KIR2DL5BQ8NHK3 375 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 DERL1Q9BUN8 251 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 WFDC10AQ9H1F0 79 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
TPM1-209ENST00000558072 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
TPM1-209ENST00000558072 TRAV21A0A0B4J279 112 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 XKRY2A2RUG3 117 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 UBE2CO00762 179 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 GCGP01275 180 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 FAM162BQ5T6X4 162 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 KPRPQ5T749 579 aaPredicted RBP9.17□□□□□ -0.94
TPM1-209ENST00000558072 LINC01551Q86U37 167 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 OCC1Q8TAD7 63 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 FAM19A4Q96LR4 140 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 SRD5A3Q9H8P0 318 aa9.17□□□□□ -0.94
TPM1-209ENST00000558072 KLLNB2CW77 178 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 MT-ND4LP03901 98 aa9.16□□□□□ -0.94
TPM1-209ENST00000558072 ZNF705DP0CH99 300 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms