RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TRAV10A0A0B4J240 114 aa11.98□□□□□ -0.49
NEK9-211ENST00000557673 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
NEK9-211ENST00000557673 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
NEK9-211ENST00000557673 NUTF2P61970 127 aaKnown RBP11.97□□□□□ -0.49
NEK9-211ENST00000557673 RANP62826 216 aaKnown RBP11.97□□□□□ -0.49
NEK9-211ENST00000557673 EIF5AL1Q6IS14 154 aaKnown RBP11.97□□□□□ -0.49
NEK9-211ENST00000557673 DPPA3Q6W0C5 159 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 CSNK1G2-AS1Q8NCQ2 148 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 FAM213BQ8TBF2 198 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 SLC35B3Q9H1N7 401 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 OTORQ9NRC9 128 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 X6R8D5 127 aa11.97□□□□□ -0.49
NEK9-211ENST00000557673 VPS13DQ5THJ4 4388 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 IGHV4-28A0A0C4DH34 117 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 ZNF705EA8MWA4 302 aaPredicted RBP11.96□□□□□ -0.49
NEK9-211ENST00000557673 NPIPB6E9PJ23 425 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 BOLA2-SMG1P6H3BVE0 249 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 FGF8P55075 233 aaPredicted RBP11.96□□□□□ -0.49
NEK9-211ENST00000557673 IQCF2Q8IXL9 164 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 OR10J6PQ8NGY7 276 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 XCL2Q9UBD3 114 aa11.96□□□□□ -0.49
NEK9-211ENST00000557673 IGHV4-4A0A075B6R2 117 aa11.95□□□□□ -0.5
NEK9-211ENST00000557673 IGKV2-40A0A087WW87 121 aaPredicted RBP11.95□□□□□ -0.5
NEK9-211ENST00000557673 IGKV2D-40P01614 121 aaPredicted RBP11.95□□□□□ -0.5
NEK9-211ENST00000557673 RBMY1A1P0DJD3 496 aaKnown RBP11.95□□□□□ -0.5
NEK9-211ENST00000557673 RBMY1CP0DJD4 496 aa11.95□□□□□ -0.5
NEK9-211ENST00000557673 MED14OSP0DP75 135 aa11.95□□□□□ -0.5
NEK9-211ENST00000557673 FXYD7P58549 80 aa11.95□□□□□ -0.5
NEK9-211ENST00000557673 RBMY1FQ15415 496 aaKnown RBP11.95□□□□□ -0.5
NEK9-211ENST00000557673 DNAH6Q9C0G6 4158 aa11.95□□□□□ -0.5
NEK9-211ENST00000557673 GGTLC3B5MD39 225 aa11.94□□□□□ -0.5
NEK9-211ENST00000557673 Q6ZTC4 211 aa11.94□□□□□ -0.5
NEK9-211ENST00000557673 TMPRSS5Q9H3S3 457 aa11.94□□□□□ -0.5
NEK9-211ENST00000557673 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
NEK9-211ENST00000557673 M0R2Z0 102 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 CSN1S1P47710 185 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 SULT1A2P50226 295 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 RAB5CP51148 216 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 SPINK13Q1W4C9 94 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 MBD3L1Q8WWY6 194 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 ODF3Q96PU9 254 aa11.93□□□□□ -0.5
NEK9-211ENST00000557673 AMBPP02760 352 aa11.92□□□□□ -0.5
NEK9-211ENST00000557673 P0DMU3 169 aa11.92□□□□□ -0.5
NEK9-211ENST00000557673 FAM231AP0DMU4 169 aa11.92□□□□□ -0.5
NEK9-211ENST00000557673 FAM231CP0DMU5 169 aa11.92□□□□□ -0.5
NEK9-211ENST00000557673 YTHDF2Q9Y5A9 579 aaKnown RBP11.92□□□□□ -0.5
NEK9-211ENST00000557673 A0A1W2PRE2 83 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 RBAKDNA6NC62 111 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 PGPA6NDG6 321 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 CRXO43186 299 aaPredicted RBP11.91□□□□□ -0.5
NEK9-211ENST00000557673 GNG5P63218 68 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 ERCC8Q13216 396 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 C9orf47Q6ZRZ4 202 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 ARL6IP6Q8N6S5 226 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 C5orf17Q8NAS9 161 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 CMTM2Q8TAZ6 248 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 RXFP4Q8TDU9 374 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 SFT2D1Q8WV19 159 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 IGF2BP2-AS1Q96M15 143 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 VGLL1Q99990 258 aa11.91□□□□□ -0.5
NEK9-211ENST00000557673 DEFB131BA0A096LNP1 70 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 FAM74A7A6NL05 159 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 INSP01308 110 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 SLC25A5P05141 298 aaKnown RBP11.9□□□□□ -0.5
NEK9-211ENST00000557673 H2AFB1P0C5Y9 115 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 CT45A10P0DMU9 189 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 UBE2G2P60604 165 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 ALKAL2Q6UX46 152 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 NDUFAF3Q9BU61 184 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 PPP1R14DQ9NXH3 145 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 RPH3ALQ9UNE2 315 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 ARL2-SNX15V9GYD0 113 aa11.9□□□□□ -0.5
NEK9-211ENST00000557673 A0A1B0GV50 99 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 PRSS29PA6NIE9 313 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 CDKN1BP46527 198 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 ZNF705AQ6ZN79 300 aaPredicted RBP11.89□□□□□ -0.51
NEK9-211ENST00000557673 Q8TAT8 98 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 FAM19A4Q96LR4 140 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 AGPAT4-IT1Q9H0P7 198 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
NEK9-211ENST00000557673 TRAV12-2A0A075B6T6 113 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 TSPOP30536 169 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 LEPP41159 167 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 C1orf158Q8N1D5 194 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 LINC00477Q96M19 166 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 ZNF492Q9P255 531 aa11.88□□□□□ -0.51
NEK9-211ENST00000557673 IGHV3OR16-12A0A075B7B8 117 aa11.87□□□□□ -0.51
NEK9-211ENST00000557673 SERTM2A0A1B0GWG4 89 aa11.87□□□□□ -0.51
NEK9-211ENST00000557673 TCRAP04437 139 aa11.87□□□□□ -0.51
NEK9-211ENST00000557673 CRISP2P16562 243 aa11.87□□□□□ -0.51
NEK9-211ENST00000557673 ZNF138P52744 262 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 177.4 ms