RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 K7ERU9 68 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SNAI2O43623 268 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 MPC2O95563 127 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SPART-AS1P0CW21 52 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 HTN3P15516 51 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 NPPCP23582 126 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 CRYBB3P26998 211 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SDC2P34741 201 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 FGF8P55075 233 aaPredicted RBP4.14□□□□□ -1.75
VPS33B-207ENST00000557470 HERV-K104P61576 105 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 LGALSLQ3ZCW2 172 aaPredicted RBP4.14□□□□□ -1.75
VPS33B-207ENST00000557470 PYY3Q5JQD4 70 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 PSMG4Q5JS54 123 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF705AQ6ZN79 300 aaPredicted RBP4.14□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF546Q86UE3 836 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 OR5AP2Q8NGF4 316 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 ORAOV1Q8WV07 137 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SLC25A38Q96DW6 304 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 PHYHIPLQ96FC7 376 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 METTL26Q96S19 204 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SDHCQ99643 169 aaPredicted RBP4.14□□□□□ -1.75
VPS33B-207ENST00000557470 SEC11CQ9BY50 192 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 ARV1Q9H2C2 271 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 FKBP11Q9NYL4 201 aa4.14□□□□□ -1.75
VPS33B-207ENST00000557470 A0A1W2PS18 150 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 MEIS3P1A6NDR6 274 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 COLCA2A8K830 154 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF705FA8MVS1 300 aaPredicted RBP4.13□□□□□ -1.75
VPS33B-207ENST00000557470 LYRM1O43325 122 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF705DP0CH99 300 aaPredicted RBP4.13□□□□□ -1.75
VPS33B-207ENST00000557470 ZNF705BP0CI00 300 aaPredicted RBP4.13□□□□□ -1.75
VPS33B-207ENST00000557470 TBPP20226 339 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 PRCDQ00LT1 54 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 DHRS2Q13268 280 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 SCGB2B2Q4G0G5 96 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 SPINK9Q5DT21 86 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 COL5A1-AS1Q5SY13 56 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 SFXN4Q6P4A7 337 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 TMED4Q7Z7H5 227 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 ZFP82Q8N141 532 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 SAMD12Q8N8I0 201 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 ISOC2Q96AB3 205 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 SEC22AQ96IW7 307 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 SMIM8Q96KF7 97 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 ATP5SQ99766 215 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 NIPSNAP3BQ9BS92 247 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 C1QTNF4Q9BXJ3 329 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 NRN1Q9NPD7 142 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 EHFQ9NZC4 300 aa4.13□□□□□ -1.75
VPS33B-207ENST00000557470 MRPL36Q9P0J6 103 aaKnown RBP4.13□□□□□ -1.75
VPS33B-207ENST00000557470 IGHV3OR16-12A0A075B7B8 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 NBDYA0A0U1RRE5 68 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 TMEM189A5PLL7 270 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 H3BMM0 161 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GPR31O00270 319 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 PPP1R2P9O14990 202 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GAGE7O76087 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GCGP01275 180 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 IGKV1-39P01597 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 IGKV1-17P01599 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 IGKV1D-39P04432 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GAGE12FP0CL80 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GAGE12GP0CL81 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GAGE12IP0CL82 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 RD3LP0DJH9 198 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 ID1P41134 155 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 ERVFC1-1P60608 527 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 HSPE1P61604 102 aaKnown RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 RANP62826 216 aaKnown RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 ERHP84090 104 aaKnown RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 MXD1Q05195 221 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 GAGE4Q13068 117 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 SURF2Q15527 256 aaPredicted RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 IZUMO4Q1ZYL8 232 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 TMEM241Q24JQ0 296 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 IDNKQ5T6J7 187 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 IGFL4Q6B9Z1 124 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 TMUB2Q71RG4 321 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 SPATA12Q7Z6I5 190 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 CMTM1Q8IZ96 169 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 C6orf223Q8N319 242 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 CCDC71LQ8N9Z2 235 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 OR13C8Q8NGS7 320 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 OR1S1Q8NH92 325 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 RNASEH2CQ8TDP1 164 aaKnown RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 ACTR3CQ9C0K3 210 aaPredicted RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 FXYD6Q9H0Q3 95 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 FNDC4Q9H6D8 234 aaPredicted RBP4.12□□□□□ -1.75
VPS33B-207ENST00000557470 MSRB1Q9NZV6 116 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 RFNGQ9Y644 331 aa4.12□□□□□ -1.75
VPS33B-207ENST00000557470 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
VPS33B-207ENST00000557470 TGIF2-C20orf24A0A0A6YYL0 155 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 TEX48A0A1B0GUV7 120 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 SSNA1O43805 119 aa4.11□□□□□ -1.75
VPS33B-207ENST00000557470 CFDP00746 253 aaPredicted RBP4.11□□□□□ -1.75
VPS33B-207ENST00000557470 PMP2P02689 132 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms