RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 IL4P05112 153 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 SLC25A5P05141 298 aaKnown RBP9.34□□□□□ -0.91
SHMT2-230ENST00000557427 EDN2P20800 178 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 S100A7P31151 101 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 RANP62826 216 aaKnown RBP9.34□□□□□ -0.91
SHMT2-230ENST00000557427 TMEM183BQ1AE95 376 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 C5orf17Q8NAS9 161 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 ZNF502Q8TBZ5 544 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 SMIM12Q96EX1 92 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 CCDC140Q96MF4 163 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 OTORQ9NRC9 128 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
SHMT2-230ENST00000557427 TRBV7-1A0A0A6YYK4 115 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 IGHV3-35A0A0C4DH35 117 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 A0A1W2PPQ1 181 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 ISLRO14498 428 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 PHOX2AO14813 284 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 TRGC2P03986 189 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 CTSGP08311 255 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 FAM3BP58499 235 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-230ENST00000557427 SNRPEP62304 92 aaKnown RBP9.33□□□□□ -0.92
SHMT2-230ENST00000557427 USF2Q15853 346 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-230ENST00000557427 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 FAM209BQ5JX69 171 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 GPHB5Q86YW7 130 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 LYPD1Q8N2G4 141 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 BLNKQ8WV28 456 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 ATG101Q9BSB4 218 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 Q9H3A6 140 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 ZNF586Q9NXT0 402 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 IL36BQ9NZH7 164 aa9.33□□□□□ -0.92
SHMT2-230ENST00000557427 C2orf70A6NJV1 201 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 ZNF98A6NK75 572 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 MRPS12O15235 138 aaKnown RBP9.32□□□□□ -0.92
SHMT2-230ENST00000557427 IGLC2P0DOY2 106 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 GPR183P32249 361 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 ERVFC1-1P60608 527 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 CD300EQ496F6 205 aaPredicted RBP9.32□□□□□ -0.92
SHMT2-230ENST00000557427 SMUG1Q53HV7 270 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 LEMD1Q68G75 181 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 DYNLRB2Q8TF09 96 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 SIGLEC8Q9NYZ4 499 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 V9GYV3 84 aa9.32□□□□□ -0.92
SHMT2-230ENST00000557427 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 TRBV6-1A0A0K0K1D8 114 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 OR2T8A6NH00 312 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 MED14OSP0DP75 135 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 ADMP35318 185 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 UBE2G1P62253 170 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 DEFB114Q30KQ6 69 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 TM4SF20Q53R12 229 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
SHMT2-230ENST00000557427 LCN12Q6JVE5 192 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 FRZBQ92765 325 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
SHMT2-230ENST00000557427 FAT2Q9NYQ8 4349 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 ZNF785A8K8V0 405 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 LGALS9O00182 355 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 TCRAP04437 139 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 TRGC1P0CF51 173 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 CBLN1P23435 193 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 GNG5P63218 68 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 OR5I1Q13606 314 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 PDE6HQ13956 83 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 GTSCR1Q86UQ5 136 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 BAGE2Q86Y30 109 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 ZNF414Q96IQ9 312 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 CHRDL1Q9BU40 450 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
SHMT2-230ENST00000557427 DYNC1H1Q14204 4646 aaKnown RBP9.29□□□□□ -0.92
SHMT2-230ENST00000557427 MGST1P10620 155 aaKnown RBP9.29□□□□□ -0.92
SHMT2-230ENST00000557427 RPL7P18124 248 aaKnown RBP9.29□□□□□ -0.92
SHMT2-230ENST00000557427 HOXA5P20719 270 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
SHMT2-230ENST00000557427 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 IBA57Q5T440 356 aaKnown RBP9.29□□□□□ -0.92
SHMT2-230ENST00000557427 UNQ9165/PRO28630Q6UXU0 137 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 ARL6IP6Q8N6S5 226 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 LINC00479Q96M42 142 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 GPR82Q96P67 336 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 HERC1Q15751 4861 aa9.29□□□□□ -0.92
SHMT2-230ENST00000557427 IGHV3OR16-8A0A075B7F1 116 aa9.28□□□□□ -0.92
SHMT2-230ENST00000557427 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
SHMT2-230ENST00000557427 TMEM213A2RRL7 107 aa9.28□□□□□ -0.92
SHMT2-230ENST00000557427 H3BTX0 84 aa9.28□□□□□ -0.92
SHMT2-230ENST00000557427 SLC17A3O00476 420 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms