RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 ERVFC1-1P60608 527 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 RHOGP84095 191 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 MEF2BQ02080 365 aaPredicted RBP4.54□□□□□ -1.68
FOXN3-215ENST00000557261 MUC21Q5SSG8 566 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 FAM78BQ5VT40 261 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 C10orf113Q5VZT2 155 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 LCN15Q6UWW0 184 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 SVBPQ8N300 66 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 MAPK1IP1LQ8NDC0 245 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 MYOZ3Q8TDC0 251 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 EEF1AKMT3Q96AZ1 226 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 TMEM14CQ9P0S9 112 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 PEF1Q9UBV8 284 aaKnown RBP4.54□□□□□ -1.68
FOXN3-215ENST00000557261 RFNGQ9Y644 331 aa4.54□□□□□ -1.68
FOXN3-215ENST00000557261 A0A087X002 238 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 A0A0G2JLM5 398 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 TRBV7-9A0A0J9YWB2 115 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 A0A1W2PRE2 83 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 WI2-2373I1.2A0A1W2PRP0 233 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 F6UZH7 168 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 NUPL2O15504 423 aaKnown RBP4.53□□□□□ -1.68
FOXN3-215ENST00000557261 HYPMO75409 117 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 TSPAN13O95857 204 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 SFTA3P0C7M3 94 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 RD3LP0DJH9 198 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 ARL14EPLP0DKL9 152 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 APELAP0DMC3 54 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 ADCYAP1P18509 176 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 PSMB8P28062 276 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 GCHFRP30047 84 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 ZNF90Q03938 601 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 PDE6HQ13956 83 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 C15orf32Q32M92 178 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 GCSAMLQ5JQS6 135 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 ZNF600Q6ZNG1 722 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 RPUSD4Q96CM3 377 aaKnown RBP4.53□□□□□ -1.68
FOXN3-215ENST00000557261 FAM167A-AS1Q96KT0 104 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 LINC00052Q96N35 136 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 EIF5A2Q9GZV4 153 aaKnown RBP4.53□□□□□ -1.68
FOXN3-215ENST00000557261 MRPL27Q9P0M9 148 aaKnown RBP4.53□□□□□ -1.68
FOXN3-215ENST00000557261 HIGD1AQ9Y241 93 aa4.53□□□□□ -1.68
FOXN3-215ENST00000557261 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.52□□□□□ -1.69
FOXN3-215ENST00000557261 MDFIC2A0A1B0GVS7 189 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 F8W036 122 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 G3V318 75 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 H3BRN7 92 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 BMPR1BO00238 502 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 TGOLN2O43493 480 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SNAPINO95295 136 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 CTSGP08311 255 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SRP19P09132 144 aaKnown RBP4.52□□□□□ -1.69
FOXN3-215ENST00000557261 LEPP41159 167 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 MEOX2P50222 304 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SLC35B1P78383 322 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 CCL20P78556 96 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 LY6EQ16553 131 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 Q56UQ5 140 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SOHLH1Q5JUK2 328 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 ZNF343Q6P1L6 599 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 PATE2Q6UY27 113 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 LINC00305Q7Z4B0 112 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SPATA3Q8NHX4 192 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 Q8WTZ3 238 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 NARS2Q96I59 477 aaKnown RBP4.52□□□□□ -1.69
FOXN3-215ENST00000557261 GPR82Q96P67 336 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SHANK2-AS3Q9BTD1 123 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 SLC25A2Q9BXI2 301 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 ZNF702PQ9H963 129 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 TREM1Q9NP99 234 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 ZNF355PQ9NSJ1 428 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 DOK5Q9P104 306 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 GNG13Q9P2W3 67 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 ZMAT5Q9UDW3 170 aaKnown RBP4.52□□□□□ -1.69
FOXN3-215ENST00000557261 MXRA5Q9NR99 2828 aa4.52□□□□□ -1.69
FOXN3-215ENST00000557261 B4DEV8 164 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 C9JCJ5 164 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 C9JQL5 133 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 C11orf94C9JXX5 98 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 OR7C2O60412 319 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 ZNF253O75346 499 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 TRGV3P03979 118 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 GATA2P23769 480 aaPredicted RBP4.51□□□□□ -1.69
FOXN3-215ENST00000557261 SRP14P37108 136 aaKnown RBP4.51□□□□□ -1.69
FOXN3-215ENST00000557261 FGF8P55075 233 aaPredicted RBP4.51□□□□□ -1.69
FOXN3-215ENST00000557261 BLCAPP62952 87 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 UBE2L3P68036 154 aaKnown RBP4.51□□□□□ -1.69
FOXN3-215ENST00000557261 ATP5G2Q06055 141 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 RHEBQ15382 184 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 C1orf194Q5T5A4 169 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 MIR17HGQ75NE6 70 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 LYPD1Q8N2G4 141 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 SIGLECL1Q8N7X8 197 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 C15orf54Q8N8G6 183 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 OR5T1Q8NG75 326 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 OR4C5Q8NGB2 326 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 FXYD5Q96DB9 178 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 SMIM12Q96EX1 92 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 SLC25A39Q9BZJ4 359 aaPredicted RBP4.51□□□□□ -1.69
FOXN3-215ENST00000557261 SDF2L1Q9HCN8 221 aa4.51□□□□□ -1.69
FOXN3-215ENST00000557261 PRELID1Q9Y255 219 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms